Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_2202 |
Symbol | |
ID | 5109147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 2435506 |
End bp | 2436027 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640503446 |
Product | DinB family protein |
Protein accession | YP_001187694 |
Protein GI | 146307229 |
COG category | [S] Function unknown |
COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0131382 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAATA CCGCCATGGG CAGCATGCTC ATCGAATACA AGCGTTGGGC AGACAAGCTT TTTCTGAACA GTGTCGCTGA ACTCCCCGCC GAGGAACTCA CTCGCGAACA TGCAGGCCCT ATCAAGACCA TCATTGCAGT GCTGAACCAT ATGTACGTCG TGGATCGAAT CTGGCAAGCC CACCTGGAAG GCCGTGAGCA TGGTTTCACG TCACGTCAGG CGATGCCCTA TCCAGACCTC TCCGAATTGC GTCAAGCTCA ACTGGAGGTC GATAACTGGC TCATTGAGTG GTATGCCAGG CAGAGCGAAG CGACATTGGC CCGTAGCATC GATTTTGCCT TCGTCTCCGG CAATCGCGGC AACATGACTG CCGAAGCCAT GGTTTTGCAT CTCGTCAATC ATGCGACCTA TCACAGAGGC TGGCTCGTGC AGATGTACTT CGAGATACCG GCCATGCCCC CGATGACAGA CCTTTGCGTG TATCTGACCG AAGCGCAGCC CGGGTCATTG ACTAACTGCT AA
|
Protein sequence | MANTAMGSML IEYKRWADKL FLNSVAELPA EELTREHAGP IKTIIAVLNH MYVVDRIWQA HLEGREHGFT SRQAMPYPDL SELRQAQLEV DNWLIEWYAR QSEATLARSI DFAFVSGNRG NMTAEAMVLH LVNHATYHRG WLVQMYFEIP AMPPMTDLCV YLTEAQPGSL TNC
|
| |