| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1954 |
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| Symbol | |
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| ID | 5110081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 2150613 |
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| End bp | 2151914 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640503188 |
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| Product | glucose/sorbosone dehydrogenase-like protein |
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| Protein accession | YP_001187447 |
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| Protein GI | 146306982 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.051744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.930845 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGC ACCTAGCACT GACCGCCCTG CCCCTGGCCC TGCTGCTGAC TGCCTGCGGC
GAAGAACCAG GCAGCAACCA GCAGTTCTAT GGCGCCCAGC CGGACCTGCC CGAGCCCGAA
CGCGGCCTCC TGCCGAGCAT GACCATTGCC GAGCCGACGC CCTGGGGTGA CCAGCGACCG
ACCGTGCCCG AAGGCTTCAG CGTCAGTGCC ATCGCCACCG ACCTGAAGAT CCCCCGGCAA
ACCCTGGTGC TGCCCAACGG CGACATCCTC GTCGCTGAGG GCCGTGGCGG CAACGCGGCC
AAGCTCAAGC CCAAGGACGT GATCGCCGGC GTGATCAAGG CACGCGGCAA CACCTCGGTG
GAAAGCGGCA ACCGCCTGAC CCTGCTGCGC GACGCCGATG GCGATGGCAC CTATGAGCTG
AAAACGGTAT TCGCCAAAGA CCTCAATGCG CCCTATGGCC TGGCGCTGCA CGAAGGCAAC
CTGTACGTGG CCAACCAGGA CGAGCTGGTG CGCTTCGACT ATGAAGAGGG CCAGACCAAG
GCCAGCGGCC CGCCGAGCAA GGTCGCCGAC CTGCCATCGG AGATCAACCA CCACTGGACC
AAGGCGCTGA CCATCAGCGA AGACGGCCGC TACCTGTACG TCGGCATCGG CTCCAACAGC
AACATCACCG AACGCGGCAT GGAGGCCGAA GTCGACCGCG CCCTGGTCTG GCAGGTGGAC
GCCGAAACCG GTGCTTACAA GCCCTACGCC ACCGGCCTGC GCAACCCCAC CGCACTGGCC
ATCCAGCCGG GCACCGGCAC CTTGTGGACG GTGGTCAACG AGCGCGACGA ACTGGGTGAG
GATCTGGTGC CCGACTACCT CACCTCGGTG CAGGAAGGCG GCTTCTACGG CTGGCCTTAC
AGCTACTTCG GCCAACACGT CGACCCACGG GTGAAACCAC AGGATGATGA AAAGGTGGCC
AGCGCCATCG TTCCCGACTA CGCCCTTGGC GCCCACGTCG CGGCGCTGGG CCTGGACTTT
TCCAGCGAGG TGATGGGCGA GCAATATGCC GACGGCGTAT TCGTCGGCGA GCACGGCAGC
TGGAACCGCA AGAACCCGGT GGGCTACAAG GTGATCTTCG TGCCCTTCGA AAACGGCCGC
CCTTCAGGCG ACCCCATCGA CTTCGTCACC GGCTTTCGCA CTGAAGACGG CAAGACCCGC
GGCCGCCCGG TGGGCGTAAC GGTCGATCCG AGCGGCGCAC TGATCGTGGC CGATGATCTG
GCCAATACGA TTTGGCGGGT GGTACGCGAA GGGGGCGAGT AA
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| Protein sequence | MKTHLALTAL PLALLLTACG EEPGSNQQFY GAQPDLPEPE RGLLPSMTIA EPTPWGDQRP
TVPEGFSVSA IATDLKIPRQ TLVLPNGDIL VAEGRGGNAA KLKPKDVIAG VIKARGNTSV
ESGNRLTLLR DADGDGTYEL KTVFAKDLNA PYGLALHEGN LYVANQDELV RFDYEEGQTK
ASGPPSKVAD LPSEINHHWT KALTISEDGR YLYVGIGSNS NITERGMEAE VDRALVWQVD
AETGAYKPYA TGLRNPTALA IQPGTGTLWT VVNERDELGE DLVPDYLTSV QEGGFYGWPY
SYFGQHVDPR VKPQDDEKVA SAIVPDYALG AHVAALGLDF SSEVMGEQYA DGVFVGEHGS
WNRKNPVGYK VIFVPFENGR PSGDPIDFVT GFRTEDGKTR GRPVGVTVDP SGALIVADDL
ANTIWRVVRE GGE
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