Gene Pmen_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1949 
Symbol 
ID5110076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp2146479 
End bp2146916 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID640503183 
Producthypothetical protein 
Protein accessionYP_001187442 
Protein GI146306977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.129845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.699527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA TCAAAGCCCT GACCTTGCCG CTACTGCTGA TCCTCAGCCT GCTCGGCGTC 
GACAGCCTGC ATGCCGCCGG TGACCTGACT CGCCGCCCGG TCGCCTTGCC CGATCTGGTG
CTGGGCAGCG AGGAAAGCGA CTACGCCATG TCGCAGCGCG AATACCAGCT GGAGACCGGT
CAGGCCTACC AGCTCAAGAT CATTTCCACC GGGCAGAAGG AGTACGCCTT CCAGGCCCCG
GAATTCGCCA CCGCCATCTT CCTGCGCAAG GTCGAGGCCG GCGGCGTGGA GATCAAGGCA
GTGACCCTGA CCGAGCTGGA ATTCGAGGAT GCCGGCGAGG CGGAAATCTT CTTCCTGCCG
GTCAAGCCGG GCAAGTTCCG CTTCTACGCC AAGGGCCTGG AAGGCAAGGG CATGCTCGGT
CATTTCGTGG TCAAGTAG
 
Protein sequence
MRIIKALTLP LLLILSLLGV DSLHAAGDLT RRPVALPDLV LGSEESDYAM SQREYQLETG 
QAYQLKIIST GQKEYAFQAP EFATAIFLRK VEAGGVEIKA VTLTELEFED AGEAEIFFLP
VKPGKFRFYA KGLEGKGMLG HFVVK