| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1704 |
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| Symbol | |
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| ID | 5109678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1874290 |
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| End bp | 1875063 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502933 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001187200 |
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| Protein GI | 146306735 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.105018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCGT ACTTTTCCCT TGTCGGCCGC ACCGCCCTGG TCACCGGCGG TACCCGCGGC
ATCGGCCTGA TGATCGCCAA GGCCTTCGTC GAGGCTGGCG CCCATGTCTA TGTCTGTGCC
CGCGATGGCG AAGCCTGCGC GCAGACCGCC GCCGAACTGT CGGCCCTGGG TCGGTGCACC
GGCATCGCCG CCAACCTGGC CAGCGAGGAA GGCGTGCAGG CCCTGGCGCG CGAGCTGGGC
GAGCGCCTCG AGCGCCTGGA CATACTGGTC AATAACGCCG GCACCACCTG GGGCGCGCCG
CTGGAAAGCT ACCCGGCCAA GGGCTGGGAG AAGGTCATGC AGCTCAACGT CACCTCGGTG
TTCGGCTGCA TCCAGCAGCT GCTGCCGCTG CTGCGCAGGG CCGGCTCGGC CGAATGCCCG
GCGCGGGTGA TCAATATCGG CTCGGTGGCC GGCATCAGCG CCATGGGCGA GCAGGCCTAC
GCCTACGGGC CGAGCAAGGC GGCGCTGCAC CAGCTGTCGC GCATGCTGGC CAAGGAACTG
GTGGGCGAGC ACATCAACGT CAACGTGATC GCGCCGGGGC GTTTTCCGAG CAAGATGACG
CGCTTCATCG CCGAGGACGA AGCAGCGCTG GCCGCCGACA CGGCGCTGAT TCCGATGAAA
CGCTGGGGCC GCGAGGACGA GATGGCCGCC CTGGCGCTGA GCCTGGCTGG CAGCGCCGGG
GCCTATATGA CCGGCGCGAT CATCCCCATC GACGGCGGCT TTCATCTGGG TTGA
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| Protein sequence | MHPYFSLVGR TALVTGGTRG IGLMIAKAFV EAGAHVYVCA RDGEACAQTA AELSALGRCT
GIAANLASEE GVQALARELG ERLERLDILV NNAGTTWGAP LESYPAKGWE KVMQLNVTSV
FGCIQQLLPL LRRAGSAECP ARVINIGSVA GISAMGEQAY AYGPSKAALH QLSRMLAKEL
VGEHINVNVI APGRFPSKMT RFIAEDEAAL AADTALIPMK RWGREDEMAA LALSLAGSAG
AYMTGAIIPI DGGFHLG
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