Gene Pmen_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1553 
Symbol 
ID5108503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1711818 
End bp1712111 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID640502781 
Producthypothetical protein 
Protein accessionYP_001187049 
Protein GI146306584 
COG category[S] Function unknown 
COG ID[COG3767] Uncharacterized low-complexity protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.320055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC TCAATACCCT GACTGCCACC CTGGGCGCTG CGCTGCTGAC TTCTGTGGCC 
TTCACTGCCC ACGCCGCGAG CAACCCCTTC GCTGCGCAGG AGCTGGCCAG CGGCTACAGC
CTGGCCGCTG CCGAGAAGGC GCAGGAAGGT TCCTGTGGTG AAGGCAAATG CGGTGGCGAG
ATGAAAGCCG ACAAGGAAGG CAAGTGCGGC GAGGGCAAGT GTGGCGGCGA GAAGAAGGCC
GATGCCGAGG GTAAATGCGG CGAAGGCAAG TGCGGCGGCG AGAAGAGCGA GTAA
 
Protein sequence
MKQLNTLTAT LGAALLTSVA FTAHAASNPF AAQELASGYS LAAAEKAQEG SCGEGKCGGE 
MKADKEGKCG EGKCGGEKKA DAEGKCGEGK CGGEKSE