Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1210 |
Symbol | |
ID | 5108711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1367363 |
End bp | 1368985 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640502435 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001186707 |
Protein GI | 146306242 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.289047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCAAA AATCCCTGCG CGCGCAGATT CTCGCCCTGC TCGGTGGCAG CCTGGCGCTG ATCCTGATCA CCGCCCTGGC CTGCTTCAGC TTTCTCTCCG GCGGCATCCA GTCCTACCGT GGCCTGCTCG ACGGTCCGCT GGAGTCCTCA CGCCTGATCG ATGCGGCCAA CGTCGAATTC AAGATTCAGG TACAGGAATG GAAGAACGTG CTGCTGCGCG GCCAGGACAG CGCCAACCTG CAACGTTACT GGGGCCAGTT CGAGGCGCAG GAGCGCAAGG TGCAGGACAT TCTCGGCCAA CTGACGCAGG TAGCCGCGGC CGACCCGACG CTCAGAACGC AGGTCGAGCG CTTGCGCAGC GAGCACCAGG CGCTCGGCGG CAACTATCGC AAGGGGCGCG ACGCCTTCGT CGCCGCCGGG GCCGATCCCA AGGCCGGTGA CGAGGCCGTG CGCGGTATCG ACCGCGCCAC CAGCGAGCAG ATGAGCGCGC TGGTCGAACA GCTGCGGCAG AACAGCCTGA GCCAGGCCGA GCAGATCAAT GCCAGCGCCG AGCGCACCAT TCTCGCCGGC ACCCTGCTGA TGCTTGCCGC CGCGCTGGTC ATCGCCGTGT TCAGCCTGTG GCTGGTCAAC CGCAACCTGA TCATTCCCAT CCGCCATCTG ATCGGCCATG TCGATCAGCT CAGCCATGGC CAGTTCGGCC AGCGCGTGGA CAGCACCCGC CAGGATGAGC TGGGCCTGCT GGCGCGCGCC GCCAATACCC TGCGCGATTT CCTCGCCAGC ACCACCGAGC GCCTGCACCA CAGCACGCGC AACCTCGACA ATGCCAGCGG CGAGCTCAAC GCCATCGCCT CGCGCATGAC CGAAGGCGTC AGCGAGCAGT TCGAGCGCAC CGATCAGGTC GCCACCGCCA TGCACGAGAT GTCCGCCACC GCCCAGGAGG TGGCGCGCCA CGCCGCCGAG GCGGCGCATG CCGCGGACGA TGCCGACGAC TCGGCACGCC AGGGCGGCAA GGTGATGCAG TCGACCATCG CCACAATCAC CGACATGCGC GGCGAGATCG CCAACACCGC CGAGGTGATC CGCCGTCTGG AAAGCGACAG CGGGCGCATC GGCAAGGTGC TGGAAGTGAT CCGCGGCATC GCCGAGCAGA CCAACCTGCT GGCGCTCAAT GCCGCCATCG AAGCGGCGCG GGCCGGCGAA CAGGGCCGCG GCTTCGCCGT GGTGGCCGAC GAGGTGCGCA CCCTGGCGCA GCGCACCGCC GAGTCCACCG CCGAGATCAA CCAGATCATC GATACCGTGC AGACCGGCGC GCTGAATGCC GTGCGCGCCA TCGAGAGCGG CCAGCAGCGC AGCGAGCAGG GGGTGACCCA GGTCACCGAG GCCGGCGCCA TGCTGCAACG CATCACCGGT GCGGTGGAGG CGATCCGCGA CATGAACCGG CAGATCGCCA CGGCAGCCGA AGAGCAGACC TCGGTGGCCG AGGACATCTC GCGCAACCTC ACCGAACTGA CCGCCATCGC CAGCGCCAAC CAGGAAAACG TCGAGCGTAC CCAGATCGCC AGCCACAACC TGCGCGACCT GTCCGGCCAG CTCGGTGAAG TGACCCGCCG CCTGGGCTCC TGA
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Protein sequence | MFQKSLRAQI LALLGGSLAL ILITALACFS FLSGGIQSYR GLLDGPLESS RLIDAANVEF KIQVQEWKNV LLRGQDSANL QRYWGQFEAQ ERKVQDILGQ LTQVAAADPT LRTQVERLRS EHQALGGNYR KGRDAFVAAG ADPKAGDEAV RGIDRATSEQ MSALVEQLRQ NSLSQAEQIN ASAERTILAG TLLMLAAALV IAVFSLWLVN RNLIIPIRHL IGHVDQLSHG QFGQRVDSTR QDELGLLARA ANTLRDFLAS TTERLHHSTR NLDNASGELN AIASRMTEGV SEQFERTDQV ATAMHEMSAT AQEVARHAAE AAHAADDADD SARQGGKVMQ STIATITDMR GEIANTAEVI RRLESDSGRI GKVLEVIRGI AEQTNLLALN AAIEAARAGE QGRGFAVVAD EVRTLAQRTA ESTAEINQII DTVQTGALNA VRAIESGQQR SEQGVTQVTE AGAMLQRITG AVEAIRDMNR QIATAAEEQT SVAEDISRNL TELTAIASAN QENVERTQIA SHNLRDLSGQ LGEVTRRLGS
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