Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_0997 |
Symbol | |
ID | 5108619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1126194 |
End bp | 1126601 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640502214 |
Product | hypothetical protein |
Protein accession | YP_001186497 |
Protein GI | 146306032 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000466996 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 8.0025e-19 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGCCCGCCG CCGTTCGCGA CCTGCTGCAA CGTTACTTTC AAGCGCTCAA TGATCGCGAT GCCCGCGCCT GTCTGGCGCT GGTCAGTGCC GACGTCACGC TGGAGCCCAA CCAGGGCTTC GTCGAACATG GACGTGAGGC GTTTGCGGCC TATCTCGAGC GCCACATGCG TTGTTATCGC GAAAGCCTCG AGCAACTGGT GATACTGACC GAGCCGGACG GGCGTCATGC CGCGTGCGAG TACCGTGTAC AGGGCGAGTA TCTGGCCACC GACGAGGGGC TGCCGGAGGC CTGCGGCCAG CGCTACGAAG CACGCGTGGG GGCCTTTTTC GAGATGCAGG ACGGTCTGAT CAGCCGCATC AGCCTGCATT TCAATCTGCC GGACTGGCTG GCTCAGGTCG ACGACTGA
|
Protein sequence | MPAAVRDLLQ RYFQALNDRD ARACLALVSA DVTLEPNQGF VEHGREAFAA YLERHMRCYR ESLEQLVILT EPDGRHAACE YRVQGEYLAT DEGLPEACGQ RYEARVGAFF EMQDGLISRI SLHFNLPDWL AQVDD
|
| |