| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0849 |
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| Symbol | |
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| ID | 5108943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 969399 |
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| End bp | 970340 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502065 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001186349 |
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| Protein GI | 146305884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.589934 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCG TCGCTGCACA GACCCTCGCC ATCACCGCGC CCGTGTTCGC CATGCTGTTT
CTCGGCGTGG CGCTCAAGCG CCTGCACTGG ATCGATCGCG CCTTTATCGA CACCGCTTCC
AGCCTGGTGT TTCGCGGCAC CATGCCGACC CTGCTGTTTC TCGGCATCGT CCGCGCCGAT
CTGAGCGCGG CATTGCAACC GGCGCTGCTG CTGTTCTTCG TCGCCGCCAC CCTGGTCTGC
TTCCTGCTGG CCTGGGGCTG GGCGATCTGG CGCATTGCCC ATGCCGAGCG CGGCATCTAC
ACCCAGGGCG CCTTTCGCGG CAACAACGGC ATCATCGGTC TGGCCCTGGC CACCAGCCTT
TACGGCGACT ACGGCCTGTC CCTGGGCGCG GTGCTCGGTG GCGTGGTGAT CCTCTGCTAC
AACGTGCTCT CGGCCATCGT CCTGGCCATC TACAGCCCAG GTGCCAGGAC CGGGCCGCTG
GCCATCGCCA GGAGCATTCT GATCAACCCG CTGATCATCG GTGTGCTGCT GGCCATTCCC
TTCGCCTACT GGCAGATCGC GCTGCCGGCG TGGCTAATGA CCTCGGCCGA ATACTTCGCG
CAGATGACCC TGCCGCTGGC GCTGATCTGC ATCGGTGGCA CTCTCAGCCT GGCTTCCCTG
CGGCAGAGCA GCGGCATTGC GCTGAGCGCC AGCCTGATGA AGATGGTCTG GTTGCCGTTG
CTCGCCACCT ACGGCGCCTG GCTGTACGGC TTCCGTGAGG CCGACCTGGC GATCCTCTTC
CTCTACTTCG CCAGCCCCAC GGCGGCCGCC AGTTTCGTCA TGGCCCGCGC GGTGGGCGCC
AACCATGAAC TGGCGGCGGC GATCATCGTC ATCACCACGC TGGCGGCGGT GATCACCACC
AACGTCGGGC TGCTGATACT GCAGTGGGGC GGCTGGATCT AA
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| Protein sequence | MFAVAAQTLA ITAPVFAMLF LGVALKRLHW IDRAFIDTAS SLVFRGTMPT LLFLGIVRAD
LSAALQPALL LFFVAATLVC FLLAWGWAIW RIAHAERGIY TQGAFRGNNG IIGLALATSL
YGDYGLSLGA VLGGVVILCY NVLSAIVLAI YSPGARTGPL AIARSILINP LIIGVLLAIP
FAYWQIALPA WLMTSAEYFA QMTLPLALIC IGGTLSLASL RQSSGIALSA SLMKMVWLPL
LATYGAWLYG FREADLAILF LYFASPTAAA SFVMARAVGA NHELAAAIIV ITTLAAVITT
NVGLLILQWG GWI
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