| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0819 |
|---|
| Symbol | |
|---|
| ID | 5108913 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 931026 |
|---|
| End bp | 931928 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640502035 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186319 |
|---|
| Protein GI | 146305854 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.476634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGGG CCATCGATAC CCTACCGGGC GCTGCACAAT CGCATGATGC TGGCATCGAC
AATTCCCAGG CCTTGAAATG GCTAGATGAA CAAGCCAGCA GACATCGGGA ACTGTTGCTC
ATCCTCGATC CTCTGGCTGA GCCGAACCCG GTTCAGCAAG TCTTCGCTGA GGGGCTGGCA
GAGGGTTACG TCAATATGTA TCTCGGGACT GAGTTTGCCG CTCTCTCCTC GGTTGCCCCC
TGGCTGATCA ACCTGGCCGA TAGCGGTTCG GAGTGCTTGC GTAGCCTGCT CGATGCGCCA
GCGCGTAACT GGGGGTGGCT GGCCAGTGTC GAAGGGTTCG ATCTGTCGAA ATGCACCCTG
CATTGGCAAG AGCGAATGCT GATAGAAGAC GGCGGGCAGC GCTCCCTCTA CAGGTTCCAG
GACAGTCGGG TGATCGCCCA CCACCTTGCA CATCTAGAGG CCGATCAGCG CGCCATACTC
TTGGGGCCTT TGGCTGCGGC TCTTTGCTGG AATGGCGAGA CCTGGGCAGC ATTCGAGAAT
CCTACTCCTG GCCAGTACCT CAGGCCTTTC CCAACGCCCT GGTTGGATAT CCCTGATCCT
GTGCCCGTTT CCCGGCAAGT GCGCCATCAC AATCTACTGC AATGGCTATG GCAAGCGTAT
CCCGATGAAA CCGCCAGGTT GGCGGAGAGC GTTCATTTGA ACGACTGGCT GGAACAGCAG
TTGACTCAGG CTGAGTGTTG GGGGTGGCGG GAGCCCGAGC AGATCCGCTT TCTATTGCGG
CACCAATTGC TTCCCGAGCT TTCCTCACAT CCAGCCTGGA GTGCAAAAGC CGGGGAGCAC
CCAGAACAAC ACTATCTGCG TTGTCGCGAT GTGATAGGAA CCGCGCAATG GGCCTGGGCA
TGA
|
|---|
| Protein sequence | MSRAIDTLPG AAQSHDAGID NSQALKWLDE QASRHRELLL ILDPLAEPNP VQQVFAEGLA
EGYVNMYLGT EFAALSSVAP WLINLADSGS ECLRSLLDAP ARNWGWLASV EGFDLSKCTL
HWQERMLIED GGQRSLYRFQ DSRVIAHHLA HLEADQRAIL LGPLAAALCW NGETWAAFEN
PTPGQYLRPF PTPWLDIPDP VPVSRQVRHH NLLQWLWQAY PDETARLAES VHLNDWLEQQ
LTQAECWGWR EPEQIRFLLR HQLLPELSSH PAWSAKAGEH PEQHYLRCRD VIGTAQWAWA
|
|---|
| |