10 homologs were found in PanDaTox collection
for query gene Pmen_0819 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_0819  hypothetical protein  100 
 
 
300 aa  607  1e-173  Pseudomonas mendocina ymp  Bacteria  normal  0.476634  normal 
 
 
-
 
NC_009656  PSPA7_3948  hypothetical protein  34.33 
 
 
282 aa  159  7e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3483  hypothetical protein  31.7 
 
 
282 aa  156  5.0000000000000005e-37  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0228033  n/a   
 
 
-
 
NC_007492  Pfl01_0152  hypothetical protein  34.69 
 
 
282 aa  153  4e-36  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2564  hypothetical protein  26.52 
 
 
261 aa  57.4  0.0000003  Marinobacter aquaeolei VT8  Bacteria  decreased coverage  0.00349718  n/a   
 
 
-
 
NC_008740  Maqu_2571  hypothetical protein  26.52 
 
 
261 aa  57.4  0.0000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.0247949  n/a   
 
 
-
 
NC_008740  Maqu_2578  hypothetical protein  26.52 
 
 
261 aa  57.4  0.0000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.0235149  n/a   
 
 
-
 
NC_007492  Pfl01_0629  hypothetical protein  29.41 
 
 
264 aa  44.3  0.002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.975067 
 
 
-
 
NC_007492  Pfl01_0455  hypothetical protein  27.98 
 
 
226 aa  43.9  0.004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.864871 
 
 
-
 
NC_009457  VC0395_A1027  hypothetical protein  22.49 
 
 
286 aa  43.5  0.004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
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