Gene Pmen_0685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0685 
Symbol 
ID5109015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp759170 
End bp759898 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content62% 
IMG OID640501898 
Producthypothetical protein 
Protein accessionYP_001186185 
Protein GI146305720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAA CTACCGACAG CCGTACCCCG ACACACAAGC CCCGTCCGCT GATCGATCTG 
GCCATCAGTA TCCTGATTCC CTCCTTCATC CTGATGAAGC TGAGCGGCGA GCATCGCCTG
GGAGCCGACG GTGCGCTGCT GCTGGCACTG GCCTTCCCGC TGGGCTGGGG CGCGTTCGAG
CTGATCAAGT ACCGCAAATT CAACTTCATC GCCCTGCTCG GCCTGATCAG CGTCGCGCTG
ACCGGCGGTA TCGGCCTGCT CAAGCTCGAC ACCCAGTGGC TGGCGGTCAA GGAAGCGCTG
ATTCCCGGGC TGATCGGCAT CGCCGTGCTG GTTTCCACCC GCACCCGCTA CCCGCTGATC
CGTACCCTGC TGTTCAACAA GACGGTGCTC AACGTCGACA AGATCCACGA GCGCCTGGAA
CAGGGCGGCC ACGTCGAGCA TTTCGAAACG CGGCTGATGC GCGCCACCTA CTGGCTCAGC
GGCACCTTCT TCTTCTCCTC GTTCATGAAC TACGTGCTGG CCAAGTGGAT CGTCAACAGC
CCGGCCGGCA CCGAGGCGTT CAACGATGAA CTGGGGCGCA TGACCCTGCT CAGCTACCCG
ATGATCGCCA TCCCCTCGAT GATCATGCTG ATGGCCATCT TCTACTACCT GTGGAAGACC
ATCCATGGCC TGACCGGCCT GAGCCTGGAA GAGATCATGG CCAACAGCGG CCAGGAATCG
CAGTCCTGA
 
Protein sequence
MTATTDSRTP THKPRPLIDL AISILIPSFI LMKLSGEHRL GADGALLLAL AFPLGWGAFE 
LIKYRKFNFI ALLGLISVAL TGGIGLLKLD TQWLAVKEAL IPGLIGIAVL VSTRTRYPLI
RTLLFNKTVL NVDKIHERLE QGGHVEHFET RLMRATYWLS GTFFFSSFMN YVLAKWIVNS
PAGTEAFNDE LGRMTLLSYP MIAIPSMIML MAIFYYLWKT IHGLTGLSLE EIMANSGQES
QS