Gene Pmen_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_0627 
Symbol 
ID5109589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp693550 
End bp694293 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content67% 
IMG OID640501838 
Producthypothetical protein 
Protein accessionYP_001186127 
Protein GI146305662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.717835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC AAGGGCTGGC GATCATCCTG GTGGTGGGGC TGGCGTACCT GCTGGCGTTG 
TTGGGCCGGC CGCTGTCGTT GATGGCGGTG AGCCTGCTGC AAGGCGTGGC GGCGGCGGCC
ATCGGCTGGC GCCTGGGGCT GTCGCGCTGG TGGCTGTGGA TCAACCTGGC GTTCCTTCCC
GCCTTGCTGC TGGTGCAGCG TGCCGAACTG CCGGCCTGGC TGTTCCTCCT GGGGTTCGTG
CTGTTGCTGC TGGTCAACTG GAACAGCCTG CGCGAGCAGG TGCCGCTCTA CCTCAGCGGG
CGCCGAGCCC GGCAGCAACT GCAACAATGG TTGGCCGAGC GCGAGCAGCC GCCGAGCTTC
GTCGATCTGG GGTGTGGTAC GGCCGGGACT CTGTTGTACC TGGCGCGGCA GTTTCCCCGC
GGGCGCTTCG TCGGGGTGGA AACCGCGCCT CTGCTGTTCG CCCTAGCCTG GCTGCGCTGC
CTGCTGCAGG ACAACTGCAG CATCCGCTAC CAGAGCCTGT GGTGCACCGA TCTGGCCGAA
TTCGACGGCG TTTACTGTTT TCTTTCGCCG GTGCCCATGC CGCGGCTGTG GGCCAAGGCC
AGGACCGAGA TGCGTGCCGG ATGCTGGTTG ATCAGCAACA GCTTCGAAAT TCCCGGCGTG
CCGGCCGACC AGGTGCTGGA GCTGAACGAG GGGCGGCAGA CCCGCTTGCT GCTGTGGCAG
ATGAAGGGCA GGGATATCGG CTAG
 
Protein sequence
MLAQGLAIIL VVGLAYLLAL LGRPLSLMAV SLLQGVAAAA IGWRLGLSRW WLWINLAFLP 
ALLLVQRAEL PAWLFLLGFV LLLLVNWNSL REQVPLYLSG RRARQQLQQW LAEREQPPSF
VDLGCGTAGT LLYLARQFPR GRFVGVETAP LLFALAWLRC LLQDNCSIRY QSLWCTDLAE
FDGVYCFLSP VPMPRLWAKA RTEMRAGCWL ISNSFEIPGV PADQVLELNE GRQTRLLLWQ
MKGRDIG