| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0339 |
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| Symbol | |
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| ID | 5110308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 345135 |
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| End bp | 345776 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501555 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001185844 |
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| Protein GI | 146305379 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.736532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGCC CCGCCAGCCC CCGCAAACCG CGCGCCAGCA GCCAGGCACG GATCGCCCAG
ATTCTCGCCG CCGCCCGCGA ACTGCTGGCC GAACAGGGCA TGGCCAACCT GTCGATCTAC
ACCGTGGCCG AGCACGCAGG CATTCCGCCG TCGTCGGTCT ATCACTTCTT CGCCAGTGTG
CCGGCCCTGC TCGAAGGGCT GACCAGCGAC GTGCACGCGG CCTTTCGCGC CTGCCTGCTG
GAGCCCGTGG ATCACGGCGG CCTGCACAGC TGGCATGACC TGTCACGCAT CGTCGAGCAG
CGCATGCTGG CGGTCTACGC CGCGGATGCC GCCGCGCGCC AGCTGATCCT AGCCCAGCAT
GGCCTGGCCG AGGTGACCCA GGCCGATCAC CAGCACGACA TCGAACTGAG CCGCCTGATG
CAGGCGCTGT TCGACCGCCA CTTCCCCCTG CCACAACTGC CGGTGGATAT CGACGTGTTT
GCCCTGGCCA TGGAGCTGGG CGATCGGGTC TACGCCCGCT CGGTGCAGCT GCATGGCGAG
ATCATCCCGC GCCTGGCCGC GGAAGGCATG CGCGTGTTCG ATGCCTATCT GGGCCTCTAC
CTGCCGGCCG CCCTGCCGAA ACGAGCCACG CCGCTTACGT AG
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| Protein sequence | MSRPASPRKP RASSQARIAQ ILAAARELLA EQGMANLSIY TVAEHAGIPP SSVYHFFASV
PALLEGLTSD VHAAFRACLL EPVDHGGLHS WHDLSRIVEQ RMLAVYAADA AARQLILAQH
GLAEVTQADH QHDIELSRLM QALFDRHFPL PQLPVDIDVF ALAMELGDRV YARSVQLHGE
IIPRLAAEGM RVFDAYLGLY LPAALPKRAT PLT
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