14 homologs were found in PanDaTox collection
for query gene Pmen_0217 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009439  Pmen_0217  hypothetical protein  100 
 
 		 341 aa  665    Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A0216  hypothetical protein  29.79 
 
 		 337 aa  72.8  0.000000000009  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0650  putative flagellar hook associated protein lafW  30.93 
 
 		 337 aa  70.9  0.00000000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_0274  lateral flagellar hook associated protein LafW  24.92 
 
 		 325 aa  66.2  0.0000000007  Escherichia coli SMS-3-5  Bacteria  normal  0.387274  normal  0.463091 
 
 
-
 
NC_010468  EcolC_3360  hypothetical protein  24.92 
 
 		 325 aa  66.2  0.0000000008  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A0248  hypothetical protein  26.69 
 
 		 355 aa  65.9  0.000000001  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_0064  hypothetical protein  26.79 
 
 		 343 aa  57.4  0.0000004  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4682  hypothetical protein  26.29 
 
 		 359 aa  55.5  0.000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.235046  hitchhiker  0.00000184712 
 
 
-
 
NC_010465  YPK_0723  hypothetical protein  30.17 
 
 		 258 aa  55.1  0.000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_04920  hypothetical protein  23.49 
 
 		 346 aa  53.5  0.000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007650  BTH_II0195  hypothetical protein  25 
 
 		 355 aa  50.1  0.00006  Burkholderia thailandensis E264  Bacteria  normal  0.995822  n/a   
 
 
-
 
NC_013457  VEA_000729  putative flagellin  23.05 
 
 		 346 aa  46.2  0.0008  Vibrio sp. Ex25  Bacteria  normal  0.662573  n/a   
 
 
-
 
NC_009831  Ssed_0058  hypothetical protein  22.48 
 
 		 341 aa  44.7  0.002  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_1102  putative alpha-isopropylmalate/homocitrate synthase family transferase  29.56 
 
 		 557 aa  43.1  0.006  Frankia sp. EAN1pec  Bacteria  normal  0.828904  normal  1 
 
 
-
 
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