| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_1102 |
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| Symbol | |
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| ID | 5669516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 1315629 |
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| End bp | 1317302 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641240034 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001505464 |
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| Protein GI | 158312956 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.828904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTCACG ACACCCCAGC TCCGCTCGGT TCAGCTCCGC TCGGCTCCGC TCACCTCGGT
GCCGCCGGCG GGCTCCCGTT CGACCGGGAG TCGCTGCACA TCTACGACAC CACGCTGCGC
GACGGCACCC AGCAGGAAGG CCTGTCGCTG TCGGTCGCCG ACAAGCTGGC GGTCGCCCGG
CACCTCGACG ACCTGGGTGT CGGCTTCATC GAGGGCGGCT GGCCCGGCTC GAACCCCAAG
GACGCCGAGT TCTTCCGGCG GGCCCGCACC GAGCTCGACC TCAACGGCGC GCTGCTGACC
GCGTTCGGGT CGACCCGGCG GGCCAGCAAG GCCGTCGCCG ACGACTCCCA GGTCGCCGCG
CTGCGCGACG CCGGCACCTC CGTGGTCTGC CTGGTGGCCA AGGCCGACCG CCGGCACGTC
GAGCGCGCGC TGCGGACCAC GCCCGCCGAG AACCTCGCGA TGATCCGCGA CACCGTCCGT
CACCTGACGA ACGAGGGCAA GCGGGTCTTC GTCGACGCCG AACACTTCTT CGACGGCCAC
CGCGCCGACC CCGCCTACGC GCTCGAGATG GTGCGCACCG CGGCCGAGGC CGGTGCCGAG
GTGATCGTGC TGTGCGACAC CAACGGCGGC ATGCTGCCCA CCCGGATCGG TGACGTCGTG
GCGGCCACGC TCGCGAGCAC CGGAGCGCGC CTGGGTATCC ACACCCACGA CGATGCCGCC
TGCGCCGTCG CGAACAGCCT GGTGGCGATC GAGGCCGGGG CCACCCACGT CCAGGGGACC
GCCAACGGCT ACGGCGAGCG TTGCGGGAAC GCCAACCTGT TCAGCGTCGT CGCGGGCCTG
GAGACCAAGC TGGGCCGCCA GGTCCTGCCG GCCGGGCGGC TGCGTGAGCT CGTGCGTGTC
TCACACGCCA TCGACGAGGT CACCAACTCG GCCCCGAGCA CGCACCGGCC CTACGTCGGC
GCCAGCGCCT TCGCGCACAA GGCCGGCCTG CACGCGAGCG CCGTCAAGGT CGACCCCGAC
ATGTATCAGC ACATCGACCC GGCCGCCGTC GGCAACGACA TGCGGATGCT CGTCTCCGAA
CTGGCCGGCC GCGCGACCCT CGAGCTCAAG GGCCGCGAGC TCGGCATGGA CCTCTCCGGG
GAGCGTGAGG CGCTCGGTCG GGTGCTGGAG ATGGTCAAGG ACAGGGAGGC CTCCGGCTAC
GCCTACGAGG CCGCCGAGGC GTCCTTCGAG CTCATGCTGC TGGACGAGGT CTCGGGCCGG
GAGCGGTTCT TCACCCTGGA ATCCTGGCGG GTCATCGTCG AGCAGCGCTC CGGCGGCGAG
GTCGTCAGCG AGGCCACGGT GAAGCTCACC TCCCACGGCG AGCGGCACGT GTCGACGGCG
GAGGGCAACG GGCCCGTCAA CGCGCTCGAC ACCGCCCTGC GCAAGGCGCT GGAGAAGGCC
TACCCGGGCC TGGCCGATCT CGACCTGGTC GACTACAAGG TCCGCATCCT CGACGGCCGG
CAGGGCACCG GTGCGGTCAC CCGCGTCCTG GTGGAGACCA GCGACGGCCG CGGCCGCTGG
GACACCATCG GCGTCGACGA GAACATCATC GCCGCCTCCT GGGTGGCGCT GCAGGACGCC
GTCACCTACG GCCTACGCCG CCAGGGTGAG CGCCCCGACC CGGACGCCGT CTGA
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| Protein sequence | MVHDTPAPLG SAPLGSAHLG AAGGLPFDRE SLHIYDTTLR DGTQQEGLSL SVADKLAVAR
HLDDLGVGFI EGGWPGSNPK DAEFFRRART ELDLNGALLT AFGSTRRASK AVADDSQVAA
LRDAGTSVVC LVAKADRRHV ERALRTTPAE NLAMIRDTVR HLTNEGKRVF VDAEHFFDGH
RADPAYALEM VRTAAEAGAE VIVLCDTNGG MLPTRIGDVV AATLASTGAR LGIHTHDDAA
CAVANSLVAI EAGATHVQGT ANGYGERCGN ANLFSVVAGL ETKLGRQVLP AGRLRELVRV
SHAIDEVTNS APSTHRPYVG ASAFAHKAGL HASAVKVDPD MYQHIDPAAV GNDMRMLVSE
LAGRATLELK GRELGMDLSG EREALGRVLE MVKDREASGY AYEAAEASFE LMLLDEVSGR
ERFFTLESWR VIVEQRSGGE VVSEATVKLT SHGERHVSTA EGNGPVNALD TALRKALEKA
YPGLADLDLV DYKVRILDGR QGTGAVTRVL VETSDGRGRW DTIGVDENII AASWVALQDA
VTYGLRRQGE RPDPDAV
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