| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0123 |
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| Symbol | |
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| ID | 5106308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 123150 |
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| End bp | 124178 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640501339 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001185629 |
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| Protein GI | 146305164 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACCT ACTACAGTGA CGACCACCAC CTGCACCACG GCAAATGCGA GCTGATCGAC
GGGCAGCTGA TGCCCTGCTT CGAGAAGCCG CAGCGCGCCG ACCATATCCT GCAACGGGTC
AAGGATCGCC AGCTCGGCGA AATCCGCGCA CCCAAGGATT TCGGCCTGGC GCCCATCGAG
CGCATTCACA GCAAGGCCTA CCTGGAATTC TTCAAGGGCG CCTGGGCGCG CTGGCAGGAA
CAGGGCGGCA AGGGCGATCT GCTGCCCTTC ACCTGGCCGG CACGTACCCT GCGGCGGATG
ATCCCCAATG ACCTGCACGG CCAGCTCGGC TACTACAGTT TCGATGGCGG CGCGCCGATC
ACCGCCGGCA CCTGGCAGGC CGCCTACAGC GCTGCCCAGG TCGCGCTGAG CGGGCAGGCC
GAGATCGCCA ATGGCGCCCA CAGCGCCTTC GCCCTGTGCC GCCCGCCAGG CCACCATGCC
GCCGGCGACG TGATGGGCGG CTACTGCTAC CTGAACAACG CCGCCATCGC CGCCCAGGCG
TTTCTCGACC AGGGCCGCAA AAAAGTCGCC ATCCTCGATG TCGACTACCA CCACGGCAAC
GGCACCCAGG ACATCTTCTA CCGGCGCAGC GACGTGCTGT TCGCCTCGAT CCACGGCGAC
CCGGCCGAGG AGTTCCCGTT CTTCCTCGGT TATGCCGACG AACTGGGCGA GGGCGCCGGC
GAGGGCTACA ACTTCAACTA TCCGTTGCCC ATGGGCAGTT CCTGGGACAC CTGGAACGCC
GCGCTGGAAC AGGCCTGCCA GCGCATCGCC GACTACGGCG CCGAGGTGCT GGTGGTGTCG
CTGGGCGTGG ACACCTACAT GGAAGACCCG ATCTCGCAGT TCAAGCTCGA CAGCCCTGAC
TACCTGGCCA TGGGCCGGCG TATCGCCGCA CTGGGCCTGC CGACCCTGTT CATCATGGAA
GGCGGCTACG CGGTGGAGGC CATCGGCGTC AACGCGGTCA ACGTGCTGGA AGGCTTCGAG
GGCGCCTGA
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| Protein sequence | MLTYYSDDHH LHHGKCELID GQLMPCFEKP QRADHILQRV KDRQLGEIRA PKDFGLAPIE
RIHSKAYLEF FKGAWARWQE QGGKGDLLPF TWPARTLRRM IPNDLHGQLG YYSFDGGAPI
TAGTWQAAYS AAQVALSGQA EIANGAHSAF ALCRPPGHHA AGDVMGGYCY LNNAAIAAQA
FLDQGRKKVA ILDVDYHHGN GTQDIFYRRS DVLFASIHGD PAEEFPFFLG YADELGEGAG
EGYNFNYPLP MGSSWDTWNA ALEQACQRIA DYGAEVLVVS LGVDTYMEDP ISQFKLDSPD
YLAMGRRIAA LGLPTLFIME GGYAVEAIGV NAVNVLEGFE GA
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