| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_0013 |
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| Symbol | glyS |
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| ID | 5106688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 13811 |
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| End bp | 15865 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640501230 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_001185520 |
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| Protein GI | 146305055 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCGA AAGATTTCCT GGTCGAACTG GGCACCGAAG AGCTGCCACC GAAAGCCCTG
AAAAGCCTCG GTGATGCCTT CCTCGCCGGT ATCGAGAAAG GCCTCAAGGC CGCCGGCCTG
AACTACGCCG CCAGCCGCGT ATATGCGGCG CCGCGGCGCC TGGCGGTGCT GGTGGAGCAG
CTGGAAGAGC AGCAGGCCGA CCGCAGCATG AACCTCGACG GTCCGCCCAT CCAGGCCGCC
TTCGATGCCG ACGGCAACCC GACCCAGGCC GCCCTGGGCT TTGCCCGCAA ATGCGGCGTG
GACATCGCCG AGATCGACCG CAGCGGCGCG AAACTGCGTT TCGCCCAGCA CATCCCCGGC
CAGCCGGCGG TGAACCTGCT GCCGACCATC GTGCAGGACT CGCTGAACGA CCTGCCGATT
CCCAAGCGCA TGCGCTGGGC CGCCCGTCGC GACGAGTTCG TGCGTCCGAC CCAGTGGCTG
GTGATGCTGT TCGGCGACGC CGTGGTCGAC TGCGAGATCC TCGCGCAGAA GGCCGGTCGC
GTGTCCCGTG GCCATCGCTT CCACGCCAAC CGCGAAGTGC GCATCAGCAG CCCGGCGAAC
TACGCCGAAG ACCTGCGCAG CGCCTATGTG CTGGCCGACT TCGCCGAGCG CCGCGAGATC
ATCAGCCGCC GCGTCGACGA GCTGGCCGCC GCCGAGCAGG GCACGGCCAT CGTACCCCCG
GCGCTGCTGG ACGAAGTGAC CGCCCTGGTG GAATGGCCGG TGCCGCTGGT CTGCTCCTTC
GAGGAGCGCT TCCTCGAGGT GCCGCAGGAG GCGCTGATCA GCACCATGCA GGACAACCAG
AAGTACTTCT GCCTGCTCGA TGCGGGCGGC AAGCTGCTGC CGCGCTTTAT CACCGTGGCG
AACATCGAAA GCAAGGACCC GGCGCAGATC GTCTCGGGCA ACGAGAAAGT CGTGCGTCCG
CGCCTGACCG ACGCCGAGTT CTTCTTCAAG CAGGACAAGA AGCAGAAGCT CGAAGGCTTC
AACCAGCGCC TGGCCAACGT GGTGTTCCAG GCCCAGCTCG GCTCGGTGTT CGACAAGGCC
CAGCGGGTAT CGGCGCTGGC CGGTTTCATC GCCCGCGAAG TCGGCGGCGA CGAGGCCCGC
GCCGCCCGTG CCGGCCTGCT GTCCAAGTGC GACCTGGCCA CCGAGATGGT CGGCGAATTC
CCCGAGATGC AGGGCATCGC CGGCTACTAC TACGCGCTCA ACGACGGTGA GCCGCAGGAC
GTCGCCCTGG CCCTGAACGA GCAGTACATG CCGCGCGGTG CCGGCGCCGA ATTGCCGAGC
ACCCTGACCG GTGCCGCCGT GGCCGTGGCC GACAAGCTCG ACACCCTGGT CGGCATCTTC
GGCATCGGCA TGCTGCCGAC CGGCTCGAAG GACCCCTACG CCCTGCGTCG CGCCGCCCTC
GGCGTGCTGC GCATCCTGAT CGAGAAGGGC CTGGATCTGG ACCTGGCCGC CGCGGTCGAC
TTCGCCGTCG CCCAGTACGC CGGCAAGGTC AAGAGCGACG GCCTGGCCGC CCAGGTGCTG
GAGTTCATCT TCGACCGCCT GCGTGCACGC TACGAAGACG AAGGTATCGA AGTGGCCGTG
TACCAGGCCG TGCGCGCGGT CAATCCGACC TCGCCGCTGG ACTTCGACCA GCGCGTGCAG
GCCGTGCAGG CCTTCCGCAA GCTGCCGCAG GCCGAGGCCC TGGCCGCTGC CAACAAGCGC
GTGTCGAACC TGCTGAGCAA GGCCGAAGGT GGCGTCGCCG CCCAGGTCGA GGCGCACTAC
TTCGACAACC CCAGCGAGTT CGCCCTGCAC GCCGCCATCC AGCAGGCAGA CCAGGCCGTA
CAGCCGCTGG CCGCCGCCCG CCAGTACAAC GAGGCCCTGG CCAAGCTGGC CAGCCTGCGC
GAGCCGGTGG ACGCCTTCTT CGAGGCGGTG CTGGTCAACG CCGAGGATGC GCGCGTGCGC
GCCAACCGTT ACGCCCTGCT GGCCCGTCTG CGCGGGCTGT TCCTCGGCGT GGCGGACATC
TCGGTACTGG GCTGA
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| Protein sequence | MSAKDFLVEL GTEELPPKAL KSLGDAFLAG IEKGLKAAGL NYAASRVYAA PRRLAVLVEQ
LEEQQADRSM NLDGPPIQAA FDADGNPTQA ALGFARKCGV DIAEIDRSGA KLRFAQHIPG
QPAVNLLPTI VQDSLNDLPI PKRMRWAARR DEFVRPTQWL VMLFGDAVVD CEILAQKAGR
VSRGHRFHAN REVRISSPAN YAEDLRSAYV LADFAERREI ISRRVDELAA AEQGTAIVPP
ALLDEVTALV EWPVPLVCSF EERFLEVPQE ALISTMQDNQ KYFCLLDAGG KLLPRFITVA
NIESKDPAQI VSGNEKVVRP RLTDAEFFFK QDKKQKLEGF NQRLANVVFQ AQLGSVFDKA
QRVSALAGFI AREVGGDEAR AARAGLLSKC DLATEMVGEF PEMQGIAGYY YALNDGEPQD
VALALNEQYM PRGAGAELPS TLTGAAVAVA DKLDTLVGIF GIGMLPTGSK DPYALRRAAL
GVLRILIEKG LDLDLAAAVD FAVAQYAGKV KSDGLAAQVL EFIFDRLRAR YEDEGIEVAV
YQAVRAVNPT SPLDFDQRVQ AVQAFRKLPQ AEALAAANKR VSNLLSKAEG GVAAQVEAHY
FDNPSEFALH AAIQQADQAV QPLAAARQYN EALAKLASLR EPVDAFFEAV LVNAEDARVR
ANRYALLARL RGLFLGVADI SVLG
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