| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_3906 |
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| Symbol | |
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| ID | 9140624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5020019 |
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| End bp | 5021248 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003631916 |
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| Protein GI | 296124138 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAG AAGCCCCCGC TTCCCAGGAT TCGTCCGAAA TTTCTCCGCG TCCAGCGACA
TTGCCGGTAT CGGCCATGCC ACCCACCATG CATCGCAGTG TGGCACTCAT CGTCCATACC
TCATCTGACT GGACGAGGCA GGTCTTGCGC GGGATTGCCC AGTATGCCAG CGAGCACGGC
TTCTGGGATT TCTTCATCGA GCCACGCGGT CACGACGAAA AACTGCTGAT TCCCAAGGGC
TGGAGTGGTG ATGGCATTAT TGCCCGCCTC ACTCACCCCG CACTCGAAAA GCAGATCCTC
AAAAGCAACC TGCCCTGCGT CAACGTCTCC TGGATGGGAC AGCACTCCCT CCGGATCCCC
AAAGTCGTCT CCGATGAAGC GGCTTGCGGA AGGCTCGCTG CCGAACATTT CCTCGAACAA
TCCTTCCGCA GCTTCGCCTA CATCGGGCCG ATTCATCGTG CGGGATATGA CGATCTGCTG
GGGAAAAACT ACATCAATAC GCTATTGCAA GCCGGTCATC AGACCAGCAT TTATCAGCCC
ACAGTTCCCA TTCCTGTCCC TGACCTTTTA ACTCAACGAA AAGGTTTTCT GCAGTGGCTG
AAAATGCTCC CCAAGCCAAC GGCAATCTTC ACCTGGAGTG GTGAAGTGGG CCGCGAGTTA
ATGACCTGTG CCCGCCTCAG CCGCTTTCGG ATTCCCGACG ATATCGCCCT GCTCGTTGGT
GAAAACGATC CACTGTTGTC AGCTCTGGCA CCAGTCCCGC TTTCCAATAT CGACCAGGCT
CCTGTCCGTG TCGGTTACGA AGCAGCGACT TTGCTCGACA AACTCATGAA TGGCGAACCA
GCACCGGAAG AGCCGATTCT TGTCCCCCCT GTCGGTGTGG TGCAGCGCCG ATCCACGGAA
ACATCGGCTG TCGATGATCC TCTGGTCGAT ATGGCCGTTC GTTTTATGCG CGACCATTTG
AGCGAACCGA TTCAGATTGC GGATGTGGAG AAAGCTCTCA ATGTCTCCCG CCGGGTGCTG
GAACACCGCT TCCATAAAGT GCTCGACGAT ACCCCAGCCA ATGTCCTTCG CAGGATGAGA
TTGCAGAACG TCAAACGCCT CCTGGGAGAA ACCACTCTTC CACTGGCCCG CATTGCCCAG
CTCACTGGCT TTAATCACGT GGAAGTTCTG GTGCGTACCT TCCGCCGTGA GCTGGGGGTC
ACTCCCGGCG AATACCGGCG TCGCCACTAA
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| Protein sequence | MSQEAPASQD SSEISPRPAT LPVSAMPPTM HRSVALIVHT SSDWTRQVLR GIAQYASEHG
FWDFFIEPRG HDEKLLIPKG WSGDGIIARL THPALEKQIL KSNLPCVNVS WMGQHSLRIP
KVVSDEAACG RLAAEHFLEQ SFRSFAYIGP IHRAGYDDLL GKNYINTLLQ AGHQTSIYQP
TVPIPVPDLL TQRKGFLQWL KMLPKPTAIF TWSGEVGREL MTCARLSRFR IPDDIALLVG
ENDPLLSALA PVPLSNIDQA PVRVGYEAAT LLDKLMNGEP APEEPILVPP VGVVQRRSTE
TSAVDDPLVD MAVRFMRDHL SEPIQIADVE KALNVSRRVL EHRFHKVLDD TPANVLRRMR
LQNVKRLLGE TTLPLARIAQ LTGFNHVEVL VRTFRRELGV TPGEYRRRH
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