Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3873 |
Symbol | |
ID | 9140591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4980169 |
End bp | 4981119 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Metal-dependent hydrolase HDOD |
Protein accession | YP_003631884 |
Protein GI | 296124106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.812708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGGA CGGATTTACG GCAGTCACTC ATTGGGAAAG TTCCCCCAGT GGTTCTGCCG CCATCACTGA AACTGCCAGT CCTCCCCACC GCCGTGATTG AATTCAATCG CAAGGCCGAC GACCCGAATG CGGGAGCTCA CGAGCTCGCG AAAATCGTCG AAGCGGATGC CGGACTGACG TGTGAACTCT TGAAGCACGC CAACTCAGCT TCCATGGGTT TACGCACCAG AGTCAATGGT GCCAAGCAGG CACTTTCTGT CCTGGGCATA CGCAACGTCA AAATGCTCCT GATTTCGTTT GGCGTTGAAA GAGCCCTCAA AGCCTCGCAA TCCAAACTGG TCAACTTTCA GGTTTTTGCC GCAGGTAATC TGGAGCGGGC ACTCTTTGCA CGCGAATTGA GTCGCCGGAC GGGTGCCGAT AGCGAACTTT CTTTTGCCGC TTCGATGCTC ACAGACTTCC TGCTCCCCGC CTTAGGGAAT GAACTACTCG AAACTTATCT GAGTTTCTTA AGTCTGCCCG ATTCCACCCG GCCCGCACTG GTCCAGTTCG AGCGGAAGGC CTTCGGCTGG GATCATGCAC TCGCCATGGG GCAGATGATG CATTCCTGGA ACTTCCCCGA CGACCTCGTC TGCTCGGTAC TGCTCCATCA TGCCGGGCTG ACACTCCTCA AACATCCGCA GATGAAATCC ACCAGTTGTG CAGTTGTGGC TTGTGCCTCA CTCATCCCCG ATCCACTCAA GCAGTCACCC GATGGACTGA AGCAGTTACT CGAACTCGAA GCGATGATCC CGAACTTATC ACTGCAAGAA ATGGCCGAGA ACGTCCAAAA GTCATTTCAG GAATTAGGCC AGGGGCTGAA AAACCCTTTC CCACTGGTCA GACGATTGGA AAAACTGCTG GTCTCAGCGA GTCCTCCAGG CCAACTGACC ACTGCCAGTT CCGGTCCATG A
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Protein sequence | MNWTDLRQSL IGKVPPVVLP PSLKLPVLPT AVIEFNRKAD DPNAGAHELA KIVEADAGLT CELLKHANSA SMGLRTRVNG AKQALSVLGI RNVKMLLISF GVERALKASQ SKLVNFQVFA AGNLERALFA RELSRRTGAD SELSFAASML TDFLLPALGN ELLETYLSFL SLPDSTRPAL VQFERKAFGW DHALAMGQMM HSWNFPDDLV CSVLLHHAGL TLLKHPQMKS TSCAVVACAS LIPDPLKQSP DGLKQLLELE AMIPNLSLQE MAENVQKSFQ ELGQGLKNPF PLVRRLEKLL VSASPPGQLT TASSGP
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