Gene Plim_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3366 
Symbol 
ID9140082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp4358212 
End bp4359534 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content54% 
IMG OID 
ProductIntegral membrane protein TerC 
Protein accessionYP_003631378 
Protein GI296123600 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.404586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTTT TGGTCTGGGC TGGATTCATC ATCCTCGTGC TGTTGATCCT GGCCTTCGAC 
CTGGGGGCCT TCAGTCGAGG CTCGCATCGA GTCATCAGTG CCCGGCAAGC CCTCTTCCGC
ACAGGTGTCT ATTTCGCACT TTCCTGCCTG TTTACAGTCT TTGTTTACTA CGCGTACGAA
AATCACTGGT TTGAATTGGG CCGCTGGGAA ACTTCGACCG CAGAAGCCGC AGCCAGCCCG
GAATCTTCCA GCGAAAAGGC CTTGACGACC ACTTCGACCG AAGCCACCGC CTCCGTCGAG
AACCGCACAG CAGACAAAAA AACTGCCGCC ACTCCACCGG AATCTGGCCA GCTCACCGAG
AGTCAATCGG CTGGAGGGCC ATCGACTGAT GCTCATCCCA CGGATGCTCA TTCCACATCT
GCCGAGTCCT CTCCTGCCCA CTCCAATTCT TCGGGCCGTG CGAAACATCA CCGGTTAGAG
ATTGCGTTTC CCTTCGAACC TTCGGCCAGC AGTGGCGACA GCGACGAAGA GCCGACAGGT
TTGCCAGAAA ATGGCAGTGA AGCAGCCATC ATGTACTTTA CGGGCTATCT GGTCGAACAG
AGCCTGAGTA TGGACAACAT CTTTGTCATT GCGCTGATTC TGTCGTTCTT CCAGGTTCCC
GCGGCTTATC AGCACCGCGT CCTCTTCTGG GGAATCATTG GTGCACTGGT CATGCGTGGA
GTGATGATTG CCCTGGGAGC AGCCATCATT CAGCGCTTCG ACTGGGTCAT TTACATCTTC
GGCGCTCTGC TGATCTACAC TGCCGTCAAG ATGCTCTTTG CTCACGACGA AGAACTCGAT
CTTGAGCAGA ATCGCCTCGT CAAATTCATC CGGCGGATCA TCCCCGTGTA CCCCGGTTTT
GTGGGGGATC ATTTCTTCAC AAAACTCGAT GGCAAACTGG CTGTCACCCC ACTCTTTGTC
GCTTTAATGA TGGTGGAAAG CACTGACCTG CTCTTTGCTG TTGATTCGAT TCCTGCGGTC
TTCGGCATCA CCCAGGATCC TTTTCTGGTC TTCAGCTCGA ACGTCTTCGC GATTCTGGGA
TTGAGATCGC TGTACTTTGC TCTCGTTGAT CTGCTCGATC GCTTCCGGTT TCTGAAGTAC
AGCCTGGTTG CCATTCTGTT CTTTGTCGGC TCCAAAATGC TGGCTCACCA TTACATCGTC
TTCTCGCCTT TTGTTTCGCT CTTTGTGATT GCGGTCTTCC TGGGCTTAGG AATTGGAGCC
TCGTTTGTGG TCCCTGCTCC GCCACACGAA GAAAAGGTCG AACCGGCTCA AGAACCCAGT
TGA
 
Protein sequence
MTVLVWAGFI ILVLLILAFD LGAFSRGSHR VISARQALFR TGVYFALSCL FTVFVYYAYE 
NHWFELGRWE TSTAEAAASP ESSSEKALTT TSTEATASVE NRTADKKTAA TPPESGQLTE
SQSAGGPSTD AHPTDAHSTS AESSPAHSNS SGRAKHHRLE IAFPFEPSAS SGDSDEEPTG
LPENGSEAAI MYFTGYLVEQ SLSMDNIFVI ALILSFFQVP AAYQHRVLFW GIIGALVMRG
VMIALGAAII QRFDWVIYIF GALLIYTAVK MLFAHDEELD LEQNRLVKFI RRIIPVYPGF
VGDHFFTKLD GKLAVTPLFV ALMMVESTDL LFAVDSIPAV FGITQDPFLV FSSNVFAILG
LRSLYFALVD LLDRFRFLKY SLVAILFFVG SKMLAHHYIV FSPFVSLFVI AVFLGLGIGA
SFVVPAPPHE EKVEPAQEPS