12 homologs were found in PanDaTox collection
for query gene Plim_3240 on replicon NC_014148
Organism: Planctomyces limnophilus DSM 3776



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014148  Plim_3240  protein of unknown function DUF1552  100 
 
 
433 aa  891    Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0506735  n/a   
 
 
-
 
NC_014148  Plim_0946  protein of unknown function DUF1552  37.7 
 
 
427 aa  260  3e-68  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.795555  n/a   
 
 
-
 
NC_014148  Plim_0569  protein of unknown function DUF1552  33.26 
 
 
452 aa  194  2e-48  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0286  protein of unknown function DUF1552  31.94 
 
 
456 aa  192  1e-47  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0128  protein of unknown function DUF1552  30.41 
 
 
464 aa  178  2e-43  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_0032  protein of unknown function DUF1552  29.44 
 
 
457 aa  146  5e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_3316  protein of unknown function DUF1552  30.43 
 
 
431 aa  119  9.999999999999999e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  0.330575  normal  0.0574883 
 
 
-
 
NC_002977  MCA1492  Tat pathway signal sequence domain-containing protein  26.41 
 
 
421 aa  111  2.0000000000000002e-23  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2494  protein of unknown function DUF1552  27.19 
 
 
439 aa  100  5e-20  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1184  lysyl-tRNA synthetase, class-2  23.76 
 
 
412 aa  73.9  0.000000000005  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.163647 
 
 
-
 
NC_013440  Hoch_5968  protein of unknown function DUF1552  25.89 
 
 
468 aa  70.1  0.00000000007  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_1263  putative transcriptional regulator, RpiR family  22.41 
 
 
466 aa  52  0.00002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0248701 
 
 
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