Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_3234 |
Symbol | |
ID | 9139949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 4176664 |
End bp | 4177767 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003631247 |
Protein GI | 296123469 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00108627 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAA TTAATCGTAG AATATTTCTT AGGCGTGCCG GGTCATGTTT GCTTGTCGCA AGTTCGCTTC AGCGAGTTTC ATCGGCTGAA GTGCCCACCC ACAATCCCAA GATTCGTATC GGTCAAATCG GCGTCGGGCA TGCGCATGCG GACAAGCTGG CCGTTTACCG CAACTCGCCC GATTACGAAG TCGTGGGGAT TGTTGAGCCG GATGAAAAAC TCAGGCTGGC AGCTCAGAAC AAACCGGCTT TTCGAGATCT CCCCTGGATG ACTCGCGAGG AACTTCTATC CCAGCCGGGC TTGCAGGCGG TCCTCATCGA GACCGAAGTT CGTCACCTGC TGGATCAAGC GGAAGCCTGC ATTGCCGCTG GCCGGCATGT GCATCTCGAC AAGCCAGCCG GAGAATCTCT CGAACAATAC CGCCGGATTC TGCAAAGCGC CCAGCGGCAA TCTCTCCTTA TGCAGATGGG CTATATGTTT CGCTACAACC CGGGCTATTT ACTTCTCAAG AAGTTTATTC AGCAAGGATG GCTGGGCGAG ATCTTTGAAG TCCACGCCGT CATGAGTAAA GTCCTCGATC CCCGCACTCG CGAGCAACTG GGAGCCTATC CTGGCGGAAT CATGTTCGAA CTGGGCTGCC ATGTGATTGA TCTGGTGCTG AATATTCTTC CGCAACCTGA TCGCATCACG TCGTTCTCCA GGCAAGTAGT CACTGGTCAG GATCGTCTGA TCGATAACAT GCTGGCGGTG TTCGAATACC CGAAAGCCAC TGCCACCATT CGCTCGACAG GCGTGGAAGT GGAAGGTTTT GCCCGCAGAC ATGTCACTGT GTGCGGGACG CGAGGCACCT TTCACATTCA ACCGCTCGAT AATCCCTCTA TCCGGCTCTC TCTGGCCGAA TCGGTGACCG ATCCAGACAC TGGAAAGGTC TATCGCAAAG GCGTGCAGGA GATCGAACTC CCCAAATATG CCCGGTATGT AGGTGATGCC GACGATATGG CGAAGATTAT TCGCGGCGAT AAGCCCAGCG ACTACTCCTA CGCCCACGAT CTTGCCGTCC AAACCGCTGT GTTGCAGGCA AGTGGCTTAC TCAAATCCCA TTAA
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Protein sequence | MKRINRRIFL RRAGSCLLVA SSLQRVSSAE VPTHNPKIRI GQIGVGHAHA DKLAVYRNSP DYEVVGIVEP DEKLRLAAQN KPAFRDLPWM TREELLSQPG LQAVLIETEV RHLLDQAEAC IAAGRHVHLD KPAGESLEQY RRILQSAQRQ SLLMQMGYMF RYNPGYLLLK KFIQQGWLGE IFEVHAVMSK VLDPRTREQL GAYPGGIMFE LGCHVIDLVL NILPQPDRIT SFSRQVVTGQ DRLIDNMLAV FEYPKATATI RSTGVEVEGF ARRHVTVCGT RGTFHIQPLD NPSIRLSLAE SVTDPDTGKV YRKGVQEIEL PKYARYVGDA DDMAKIIRGD KPSDYSYAHD LAVQTAVLQA SGLLKSH
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