Gene Plim_3145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_3145 
Symbol 
ID9139859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp4068157 
End bp4068828 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003631159 
Protein GI296123381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGTC GCGATCTCAC ACACATTACG TTCGTGCTCG ATCGATCGGG TTCCATGACA 
TCGATCAAAG CCGCCACCAT CGAAAGTTTT AATGCCTTTC TCAATTCCCA AAAATCATTG 
CCCGGCTGCG CCACGATGAC TCTGGTGCAG TTCGACTACG CCTACGAACT CCTGGCCAAT 
ATGCAGCCAC TCGACGCGAT ACCTGAACTC GACATTGAGA CATTCATCCC CCGCGGTTCG 
ACCGCATTAC TTGATGCCAT GGGCCGGGCG ATTGCTGAAA CTGGGGAAGC ACTTTCAAAG 
CTGCCCGAAG CAGATCGCCC GGGAACGGTG ATCTTCGTGA CGCTGACCGA TGGTGAAGAG 
AATTCGAGTC TGCAGTTCGA CATGGCGACC ATCAATCAGC AGATCAGCCA TCAGCGGTCG 
GTCTATCAGT GGCAGTTTGT TTTCCTCGCA GCCAATCAGG ATGCGATTGC CACGGCAGCG 
AACCTGGGGA TCGGTGCCGG CCAGGCACTC CGTTTTGCCA GCGATCCCGA AAAAGTAGCC 
GCCACTTTTG ACATTATGAA CGCACAAATG CAGAAGGTTC GCGCTGCGAA AATGGCCGAT 
GACGACGAGG CTGACCCACT CCTCAGTGAA ATCGAATTCA CCGACGCGAT GCGAATTCTG 
GCGGATGAAT AA
 
Protein sequence
MTRRDLTHIT FVLDRSGSMT SIKAATIESF NAFLNSQKSL PGCATMTLVQ FDYAYELLAN 
MQPLDAIPEL DIETFIPRGS TALLDAMGRA IAETGEALSK LPEADRPGTV IFVTLTDGEE 
NSSLQFDMAT INQQISHQRS VYQWQFVFLA ANQDAIATAA NLGIGAGQAL RFASDPEKVA 
ATFDIMNAQM QKVRAAKMAD DDEADPLLSE IEFTDAMRIL ADE