Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2852 |
Symbol | |
ID | 9139564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 3696837 |
End bp | 3698399 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_003630873 |
Protein GI | 296123095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAG TCTTCAATAT GCCGAATTTC TTCTGTAAGG CGACTATGCG TTTGGAATTA CTTAAATCGA TTCTGATGGG AAGGCATCCA TTCCATGGGC ATGCCTCAAT TTTCAAATGT CGATCGTTCT GTTTGCCTGA AGTCAGGCAG TCGAATTGCC TGAAGGCCAT CAAGATGCAG TCAAGATTTC ATCAACTAAA GCGACACTGC TCACCGGCAT GTTCGCGAAC TTGGCGATCC TGGTGCCCTC TCGCATTCGC TGCAGCTTTG ATTGTCACTA TTGCCGGCTG TGCAAAGCGT CTCGAAGAAC ATCACGCCGA GCATCATCTG GTGAAAGTCA CCAGTGCTAT CGCCAAAGAC ATGCAGATCA CCGAGCAGTA TGTCAGCCAG ATTCATTCCT GCCGCCATAT TGAACTGCGT GCCCTCGAAA GTGGCTACCT CGAAGAAATC AAAATCAAGG AAGGCCAGTT TGTTAAAAAA GGTGACATCC TCTTTCGTGT CCTGGCAACC CTCTATCAAG CCCGCCTCGA GTCCGATATC GCCGAAGCAC AACTCGTAGA GATCGAATAT AAAAATACGA AGAAACTATT TGAGCAAAAG GTCGTTTCCG AGCAGGAAGT GGCTCTGGCA CAGGCCAAAC TTGCTAAAGC CAATGCCAAA GTGAAACTGG CTCAAGCCGA GCTGAATTTC ACCGAAGTTA AAGCTCCTTT TGACGGGATT ATTGATCGCC TTCGCCAGCA GCAAGGCAGC CTTGTTGCCG AAGGGGATAT TCTCACGACA CTCTCTGATA ACAATGTCAT GTGGGCCTAC TTCAATGTCC CCGAAGCCAG GTATCTGGCC TATCAGCAAG AGGTCAAAGA CGGACAGGCC GATGTCAAAG TGGAACTCGT GCTGGCCAAT CACACCACGT TTCCACTCCC CGGAAAGATC ACGGCGATTG AGGCTGACTT CAATAACACG ACAGGCAATA TTGCCTTCCG TGCCGACTTT CCCAATCCGG AACAACTGTT AAGGCATGGT CAGACCGGAA CCATCCTGCT GCATAAAACA TTGAAAGATG CCGTCGTTAT CCCGCAGCGG GCCACCTTTG AAATTCTGGC TAAGCGGTTC GTTTATGTTG TCGAACCTGT GCCCGAAGGT GATGGTGAAG GTAAAGACGA ATCTGAAATG GCCGATTCGC ACCATGCCCA GGCTCACACG GAAGACGACG ACGACGATGA AAAAAAGGAC AAAAAGCCCT CAGCTAAACC CGCTCCCAAG CGGCCACCAT TGCCACACGA AAAGAAACCG CACGATGACA AGCATCATGA TGATCATTTG AAGAAACTCT CTCCCGAACA CCATGCCGAG CATCACGCGA ACACGCTCAA GGGCATCGTG CGTCAGCGGG AGATCGAAAT ACGTAATGAA ATGGATGATA TCTTTATTAT CAGGAGTGGT CTAAAGGCGG GTGAAAAGAT CGTTCTCGAA GGTGTGCGGC AGGTTCGAGA TGGTGACGAG GTCGAGTTCG AGTACATCGA CCCCGTAGAG GTTCTCGGTC ATCTCAAGAA CAAAGCCGAA TAG
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Protein sequence | MQEVFNMPNF FCKATMRLEL LKSILMGRHP FHGHASIFKC RSFCLPEVRQ SNCLKAIKMQ SRFHQLKRHC SPACSRTWRS WCPLAFAAAL IVTIAGCAKR LEEHHAEHHL VKVTSAIAKD MQITEQYVSQ IHSCRHIELR ALESGYLEEI KIKEGQFVKK GDILFRVLAT LYQARLESDI AEAQLVEIEY KNTKKLFEQK VVSEQEVALA QAKLAKANAK VKLAQAELNF TEVKAPFDGI IDRLRQQQGS LVAEGDILTT LSDNNVMWAY FNVPEARYLA YQQEVKDGQA DVKVELVLAN HTTFPLPGKI TAIEADFNNT TGNIAFRADF PNPEQLLRHG QTGTILLHKT LKDAVVIPQR ATFEILAKRF VYVVEPVPEG DGEGKDESEM ADSHHAQAHT EDDDDDEKKD KKPSAKPAPK RPPLPHEKKP HDDKHHDDHL KKLSPEHHAE HHANTLKGIV RQREIEIRNE MDDIFIIRSG LKAGEKIVLE GVRQVRDGDE VEFEYIDPVE VLGHLKNKAE
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