Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2718 |
Symbol | |
ID | 9139430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 3527537 |
End bp | 3528304 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003630740 |
Protein GI | 296122962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.15322 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATTTC AGAACCGTGT TGTTTTGATC ACTGGAAGTG CGGCTGGGAT TGGTGCCGGC TGTGCCCAGG TATTTCTGGA CGAAGGAGCG AGAGTCATCT CGTTGGATCG CGATCAGACT GCACTGGAGA AATGGCTCGA AAACCTGGCT CCTGCACAAC GCGAGCAGGT GTGGCCGATT GTCTGTGATG TGGCCCATAC ACCCCAACTG CAGAATGCAA TCCAGTCGGG TATCCAACGT TTTGGTCGCC TGGATTGCCT GATTAACAAC GCAGGGATCC ATCCTCCCGC CTTGACGATT GCCGAAACAT CTCTGGAACT GGTCGAGCAC GTGCTGCGAG TCAACTTTAT TGCCACGTTC GCCGCCAGTC AGGCGGTCGT TGAGGAACTC AAAAAGACTC GCGGCACGAT CATCAATATC TCATCGATGA CGGCGGTCCT TGGTCAGGAA AACTCAACCG CGTATGCGGC TTCGAAGGGT GCCCAGGTGA GCTTCACCAA ATCGCTGGCC CTGGAGCTGG CACGCTATGG AGTGCGGGTG AATTCCATTC TTCCCAGTAA TGTGGATACG CCTTTGATGC GTTCCTGGGC CGCTTCTCTT GCTGATCCGG AAGCGGCTCT CGAGCGAGTG GCCCGCTTAC AACCCTTGGG ACGGATGGCC ACCCCGGAGG AAATCGGAAA AATCGCTCTC TTTCTGGCCA CTGAGGACTC CAGCTTTCTC ACTGGACAGG CCATAGAAGC CGATGGCGGG GCAGCACTGG ATTATTAG
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Protein sequence | MRFQNRVVLI TGSAAGIGAG CAQVFLDEGA RVISLDRDQT ALEKWLENLA PAQREQVWPI VCDVAHTPQL QNAIQSGIQR FGRLDCLINN AGIHPPALTI AETSLELVEH VLRVNFIATF AASQAVVEEL KKTRGTIINI SSMTAVLGQE NSTAYAASKG AQVSFTKSLA LELARYGVRV NSILPSNVDT PLMRSWAASL ADPEAALERV ARLQPLGRMA TPEEIGKIAL FLATEDSSFL TGQAIEADGG AALDY
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