Gene Plim_2385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_2385 
Symbol 
ID9139096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp3108153 
End bp3108806 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF1080 
Protein accessionYP_003630410 
Protein GI296122632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.40187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTGGC AACGATGGGT TTGTTGGACG GGAATGCTCT GTGGAGTTTT TGCCTGGTGC 
GGAGGAAATT TATCAACAGC CCATGCGGCT GATCCGGTCT CATTGTTTGA TGGGAAATCG 
TTCGCAGGGT GGGAAGGTGA CACGACAAAA ACATGGCGGG TCATCGATGG CGTGATTGTG 
GGTGGCTCGC TCAAAGAAAA GGTTCCCCGT AACGAGTTTC TGGCCTCGAA AAAAAGTTAC 
GGGAACTTTG AATTGCGGCT GAAGTACAAA CTTGAGGGAG AGGAAGGATT CGTAAATGGT 
GGCGTGCAGA TTCGCTCGGA GCGGATTCCG GATCATCACG AGATGATTGG CTATCAGGCC 
GATATTGGAC AGGGGTATGA CGGGGCTCTT TATGACGAGA GTCGGCGGAA CAAAATGCTG 
GCTAAGCCGA CGGCTGAAGT TCTGGCCAAT TCATTGAAGA AAGGTGAATG GAACGATTAC 
CGCATTCGAT GTGAAGGCCC GCGAATTCGT CTGTGGCTCA ATGGTGTCGA AACAATCGAC 
TACACCGAAG AAGACGCCAA GATCCCACTC GCAGGACGAC TGGCGCTGCA GATTCATGGT 
GGCGGAGTGG CGGAGATACG CTTTAAGGAC ATTTTCATCG AAGAGTTGCC TTAA
 
Protein sequence
MMWQRWVCWT GMLCGVFAWC GGNLSTAHAA DPVSLFDGKS FAGWEGDTTK TWRVIDGVIV 
GGSLKEKVPR NEFLASKKSY GNFELRLKYK LEGEEGFVNG GVQIRSERIP DHHEMIGYQA 
DIGQGYDGAL YDESRRNKML AKPTAEVLAN SLKKGEWNDY RIRCEGPRIR LWLNGVETID 
YTEEDAKIPL AGRLALQIHG GGVAEIRFKD IFIEELP