Gene Plim_2365 details

Gene Information

• Locus tag: Plim_2365
• ID: 9139075
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 3074072
• End bp: 3077395
• Gene Length: 3324 bp
• Protein Length: 1107 aa
• Translation table: 11
• GC content: 52%
• Product: outer membrane protein assembly complex, YaeT protein
• Protein accession: YP_003630390
• Protein GI: 296122612

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCACAC TGTTGTGGGC GATTTTCTGG GCAGGAACTG CTGTGCATGG CCAGTCCGCA 
CCATCAGGCT CACCGGTACC CGCCAAAGCT GACCGCAATT CACTCTCGAC ACCGCTTTTC 
GTGCCACCAG CAGCTTTCAC TTCGGGATCA CGCTCGCCGG TTGCTCGTGG ACAGAATGGA 
GATGATCTTG AACCCTGGAT GCTCGACGAA CCAGGTCAGG CCACATCACC CACCGTCAAG 
ACGGTCAGCA GCACCAAGTC CGACCAGGAA ACAGGCCGTG CTCGCCTCGA AGAAGATCGA 
CCAGTTCTGC CAGGTGGATT CTCGAAACCA CAGGTGACGC CCGCAGGTGG TACAACTCCC 
CAGCGAAAAA CGCTGGCACA GGTCATGCAT CCCGAGGACG AACTTCTCCT CGATGAAAAA 
GATCGCGACA GTGGCAACTT CCCGAAGTTT GACCCGATGA AGAAAAAACC TGGGCAAATC 
TTGCGAACTT CAGCCGAAGA GCAGGCCCCG GCCGAAGTCG ACTTCAATTC CCAGGTTGTC 
GAAGTTCGTG TCGAAGGGAA CGACACCATC CAGGTGCGAG AAATCGAAAA GCATATTAAG 
GTCCGCCCCA ATCGCACTGT TAACGAACGC CTGATCAAAC AGGATGTGGA CGCTCTGGTA 
CGCACTCGCT GGTTCACCAC CGTCGAACCC TACGTTCGAC AAACCGACGA AGGTCTCGTC 
GTCATCTACC GTGTCCTGGA GCGGCCGATC GTTCGCGATG TGCAGTATAT TGGCAACCAG 
AAGATCAAAA CATCCGTCTT CGAAGGGCTC ACCAACTTAA AGCCCGGCAG CCCTTACGAT 
ATCAGCGCCA ATCGTGAATG TGCTCGCCGA ATTGAAGCTC ACTACAAAGA CAAAGGCTAT 
TCGTTTGCGA CTTGTACGCT GGAAAAGGGC GATTCCCGCG ACGAACGAGA GGTTGTCTTC 
CGCATTCATG AAGGCCCCAA AGTGGGTGTG GATGCCATTC GCTTCGAAGG AAATGAGTTC 
TTCAGCGACA GCCTGCTCAA AACCAAGAAA GTTTCCAAAA CCCGGGTTCT CAGGCTCTTC 
GGTGGTAAAT ATGACGAATC GACCATTCCG GATGATAAAG AAAGTCTGCG GCAGTACTAT 
CACAGCCTTG GCTTCTTTGA AGTCGAAATT ACTCATCGAG TCGACTTTAA CGAGAGCAAG 
TCAAGTGCTA CCTATGTCTA TGTGATTAAG GAAGGCCCTC GATACAAGAT TCGCAATATT 
TCCGTGGAAG GGAACAACGT TCTTACTGAG GCCGAAATTC GTCAGTACAT TAACTTCAAG 
ACGGGCGATC CTTATAGTGC CCGCGACATT GCGACAGATG TTGACAAGAT TCGTTCCCGG 
TATGGTGAAC AGGGACGACT CTTTGCGACG GTCGATGCGA TCCCACAGTT TCTGGAAACA 
CCCGGTGAGC TCGATCTGAT TATCCGTATC AATGAAGACA AGATCTACGT CGTCCGCGAG 
TTCCGCGTGC ATATTGAAGG CGATTACCCT CATACGAGGC ATAACCTGCC CCGGAACATC 
TCGCGAATTC ACCCGGGTGA TCTCGCCGAT CCTAAACTGA TTAAAAAATC GGAACGACAA 
CTTGCTGGAT CTGAATATTT TGAGGGTGGG CCTCAGAATG GACCTCGGCT AGAAATTTCG 
CGAGTCTCCG AGATCGCCTG GCTGCAGGAT CGGAGTCAAC TGGCTGAAGG TGGCGATTCC 
AAGGCACTCG GTCAGTCAGA GTTTCTTTCG CCAAAACCGG ATTTTCTGTC AGAAGCGAAT 
TGTCTGCCAA CTCAAAATAG TTCGACTTCT GGTTCATCAG CAGGGCGAGT CCAATCACGA 
TCTGCTTCGA ATGGGGCAGG TGCTGGAAGT CCATCCGTGC AGCAGGAACC GGAAGGACGC 
AGCTATCTGA ATGGCAGCGG ATTTTCTCAA CCTTCAGTAC CAACGCCATC GCGGACCGTC 
GGAAAAGCTC CCAGTAGCCA GCCATCCTCG AAAAAGACCG AGCCAGATTC CGGGGCAGAC 
GATCCCGACG GGATCTATTT CATGCCCGGC TCGATGTTGA AAGTCGAGCA GCCTCAAAGT 
GTCGATGCCT CTGATCCACA CGTCAGCGTT GTTCGCGGGC AGACGCGTGA CATGCGTGCT 
CCTCAAAACT ATGAATATGA TAACAGCCCC CAGGGAGATC CCTACGGCAA TCCTCGTCGC 
TTTGACCAGA ATATCTATGA TAACTCGGTT CCACCAGAAT TTATTGATAT CGATGCGTAT 
TTGAAGGAAG CTCGCACCGG GCGGCTGATG TTCGGCGTCG GTGTGAACAG TGATGCCGGT 
GTGATTGGTA ACATTGTTCT CAGTGAATCG AATTTTGATA TCTTCCGCCC ACCCACCAGC 
TTTGAAGATA TCGTCAATGG CACGGCCTGG CGTGGAGCTG GTCAGCGATT TCGCTTGGAA 
GCGGCACCAG GTAGTGAGGT CAGTCGCTAC ACCGTCGACT GGTCAGATCC CTATTTCATG 
GATAGTGACT ACAATATCGG TGTCAGTGGT TTCTACTACA CTCGATTTCT CGAGTTCTGG 
CAGGAACAAC GCTTAGGTGT GCGGCCACGT GTTGGTCGGC AGTTGACGCC TGAGTGGTCA 
GTTTCCGGAG CGATTCGTAT TGAAGATGTC CAAGTAGATA ATCCTGTCTT TCCACAACCG 
GAGAGTCTAA CGGAAGTGGT CGGAAGTAAT TTCCTGACGA CAGGCCGCAT TGGTCTGGCA 
CATGATACGC GCGATGCCCC GTTTAATCCT TCGGAAGGAC ATTTTATTGA AATGTCCTAC 
GAACAGGCCT TTGGTGATTT TGTCTATCCC AAGCTGGAGT TAAATGCCTG GCAGTACTTT 
ACGACTTATC GCCGTCCCGA TGGTTTCGGT AAACATATTC TCTCTCTCCA TGCCGATGTG 
GGTTGGACAG GGAGCGATAC ACCGATCTTC GAAAACTTCT ATGCTGGTGG TTTCCAATCG 
TTCCGCGGCT TCCGGTTCCG TGGTGTCAGC CCCGTGAATA CCGGCGTTCG TACCGGTGGT 
AACTGGATGT TCCTCGGTGG TGCCGAGTAT CAAATGCCAG TCACCGCCAA CGAAATGCTG 
CATCTGGTGG CATTCACTGA CTTCGGTACA GTCACCGAAG ATGTGACACT CAATAACTTC 
CGTCTGTCAG TTGGTGGTGG CTTGAGAATC ACTCTGCCAG CGATGGGGCC CGCACCCATT 
GCTCTCGACT GGGCTGTTCC CATCATGAAG GAAGAATTCG ACCGGACACA ACTCTTCAGC 
TTCTACATCG GCTTTACTCG ATAA 

 

Protein sequence

MFTLLWAIFW AGTAVHGQSA PSGSPVPAKA DRNSLSTPLF VPPAAFTSGS RSPVARGQNG 
DDLEPWMLDE PGQATSPTVK TVSSTKSDQE TGRARLEEDR PVLPGGFSKP QVTPAGGTTP 
QRKTLAQVMH PEDELLLDEK DRDSGNFPKF DPMKKKPGQI LRTSAEEQAP AEVDFNSQVV 
EVRVEGNDTI QVREIEKHIK VRPNRTVNER LIKQDVDALV RTRWFTTVEP YVRQTDEGLV 
VIYRVLERPI VRDVQYIGNQ KIKTSVFEGL TNLKPGSPYD ISANRECARR IEAHYKDKGY 
SFATCTLEKG DSRDEREVVF RIHEGPKVGV DAIRFEGNEF FSDSLLKTKK VSKTRVLRLF 
GGKYDESTIP DDKESLRQYY HSLGFFEVEI THRVDFNESK SSATYVYVIK EGPRYKIRNI 
SVEGNNVLTE AEIRQYINFK TGDPYSARDI ATDVDKIRSR YGEQGRLFAT VDAIPQFLET 
PGELDLIIRI NEDKIYVVRE FRVHIEGDYP HTRHNLPRNI SRIHPGDLAD PKLIKKSERQ 
LAGSEYFEGG PQNGPRLEIS RVSEIAWLQD RSQLAEGGDS KALGQSEFLS PKPDFLSEAN 
CLPTQNSSTS GSSAGRVQSR SASNGAGAGS PSVQQEPEGR SYLNGSGFSQ PSVPTPSRTV 
GKAPSSQPSS KKTEPDSGAD DPDGIYFMPG SMLKVEQPQS VDASDPHVSV VRGQTRDMRA 
PQNYEYDNSP QGDPYGNPRR FDQNIYDNSV PPEFIDIDAY LKEARTGRLM FGVGVNSDAG 
VIGNIVLSES NFDIFRPPTS FEDIVNGTAW RGAGQRFRLE AAPGSEVSRY TVDWSDPYFM 
DSDYNIGVSG FYYTRFLEFW QEQRLGVRPR VGRQLTPEWS VSGAIRIEDV QVDNPVFPQP 
ESLTEVVGSN FLTTGRIGLA HDTRDAPFNP SEGHFIEMSY EQAFGDFVYP KLELNAWQYF 
TTYRRPDGFG KHILSLHADV GWTGSDTPIF ENFYAGGFQS FRGFRFRGVS PVNTGVRTGG 
NWMFLGGAEY QMPVTANEML HLVAFTDFGT VTEDVTLNNF RLSVGGGLRI TLPAMGPAPI 
ALDWAVPIMK EEFDRTQLFS FYIGFTR