Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_2197 |
Symbol | |
ID | 9138901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 2830160 |
End bp | 2831404 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_003630222 |
Protein GI | 296122444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0747984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGACG CTCAGCCCGC CCTTGCCTTT CCCCCGGTTG AAGATCAACT CAAGGTGATC TTGCGGGGAG TCGAGAAAGT GGTTCCCGAA GAGGAACTGG CTCGCAAGTT GGCAAAAAGC CGAGAAACCG GCCGTCCGCT GCGAATCAAG TACGGCATCG ACCCCACGGG GATTGATGTG CATCTGGGGC ATACCGTTCC TTTGAGAAAG CTGAGGCAGT TCCAGGAACT GGGTCACCAG GCTGTGCTGA TCATTGGCAA CTTCACCGCC ATGGTGGGTG ACCCCAGTGG GCGCGACCAG GCCCGGGCCA AACGTCTCTC AGCCGAAGAA GTCGAAGCCA ACGCGACAGA TTATCTGAAG CAGGTGGGTA AAGTTATTGA TCTCTCGAAA ACCGAAATTC ACCGCAATGG TGAATGGTTT TCCAAGATGA CTTTTGCCGA CATTCTCACG CTGTGCAGCA AGGTGACTGT CGCCCAGCTT TTGACACGCG ATGACTTTGC CAAACGCTAT GCCAGCCAGT CACCCATTTT CCTGCACGAA TGCCTTTACC CTGTGATGCA GGCCTGGGAT TCCGTCGAGA TCAAGTCCGA TATCGAACTG GGCGGCACCG AGCAGCTTTA CAGCTTTATG CTGGCTCGCG ATCTGCAGCG TGACCAGCAG CTTGAACAGC AGTTAGGGGT GATGTCCCCC ATTCTGGTTG GGCTCGATGG CAAAAGACGC ATGGGGAAGA GCCTGGGGAA TTACATCGGC ATTGCTGAGT CACCACTGGC CATGATGAAA AAGTTCATGC AGATTCCCGA TGAAGTCATG CCCATGTACT TCGAACTGTT GACGAATATC CCCCTTGATG AAGTTCAGCA ACTCTTGGCA GGTCATCCCA AACTGGCAAA ACAACGCCTC GCCAGAGAAG TCATTGCCCA ATACCATACC TCGACAGCAG GCGATGAAGC GATTCAGCAA TGGGAAGCGG AAGTCAGTGC CGGTGCCCTC CCCGCCGACA TTGAACAAGT CACCATCGAG GCCTCCGTTG TTTCTAATGG AACTGTGACA GCCGCAATCC TTTTCAAACA GGCGGGGCTG TGCCCCACAA CTTCCGATGC GAGGCGGCTG ATCAGCCAGG GAGGTGCCTA CTTTGGGGAC GATCTCCAGG TGATCAGTTC TCATGACCAG GCGATCCCGA TCACGAATGG TCTGCTTCTC AAAGCCGGCA AAAAGCGTTA CGCCAGGCTT AACCTCCCCA GCTGA
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Protein sequence | MSDAQPALAF PPVEDQLKVI LRGVEKVVPE EELARKLAKS RETGRPLRIK YGIDPTGIDV HLGHTVPLRK LRQFQELGHQ AVLIIGNFTA MVGDPSGRDQ ARAKRLSAEE VEANATDYLK QVGKVIDLSK TEIHRNGEWF SKMTFADILT LCSKVTVAQL LTRDDFAKRY ASQSPIFLHE CLYPVMQAWD SVEIKSDIEL GGTEQLYSFM LARDLQRDQQ LEQQLGVMSP ILVGLDGKRR MGKSLGNYIG IAESPLAMMK KFMQIPDEVM PMYFELLTNI PLDEVQQLLA GHPKLAKQRL AREVIAQYHT STAGDEAIQQ WEAEVSAGAL PADIEQVTIE ASVVSNGTVT AAILFKQAGL CPTTSDARRL ISQGGAYFGD DLQVISSHDQ AIPITNGLLL KAGKKRYARL NLPS
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