Gene Plim_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1704 
Symbol 
ID9138405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp2213228 
End bp2213647 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content51% 
IMG OID 
ProductStress responsive alpha-beta barrel domain protein 
Protein accessionYP_003629733 
Protein GI296121955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACACAA AAGCTGTATC TGTTGCGACC TTCAAACTCT GGAGCCTCAT TGTGACAGCC 
GCGATGATGT CTGCCTGTCT GCCTCAATCC GCCCTCAGTG ACGACGCTGC TCCACAGCTT
TTAAGGCACG TTGTGCTGTT CCAGTACAAG GAAGGCACCA CACCAGAGCA GATTGAAGAA
GTCACCAAAG CGTTTGCTGG GCTAAAAGGA AAAATCAGCG AGATTGTCGA TTTTGAATGT
GGCACCGATG TCAGCGTTGA AGGCAAAGCG GGTGGCTTCA CCCATGGATA TGTGGTCACC
TTCAAAAGCG AGAAGGATCG CGACACTTAC CTGCCACATC CAGCCCATAA AGAGTTCGTC
AAGCTTGTCG GGCCACGCCT GCAAAACGTG CTTGTCTTTG ATTACTGGGT GAAGAAGTAA
 
Protein sequence
MHTKAVSVAT FKLWSLIVTA AMMSACLPQS ALSDDAAPQL LRHVVLFQYK EGTTPEQIEE 
VTKAFAGLKG KISEIVDFEC GTDVSVEGKA GGFTHGYVVT FKSEKDRDTY LPHPAHKEFV
KLVGPRLQNV LVFDYWVKK