Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1210 |
Symbol | |
ID | 9137898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 1548361 |
End bp | 1550214 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | conserved repeat domain protein |
Protein accession | YP_003629244 |
Protein GI | 296121466 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.2077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAGAA GAGTGTGGGT TCTCGCTATG TCTGCAGCGG CTGCACTCGC TCCCAGCCTG TGCCCGGCTG CTGAAACTTC AACAACCAAG CCAGCCGGAC GGATTGCTGC GACACCATCG GCCGATGTGC CGACGAAGTA CTCGCGAACT CAGCCTGCAC AGGCCGGGGC TGGTACTAGC AGCACCAGTT CTAGCAAATA TAGTGAGCTA TTTGGTGAAG CTCCCAAGGC GACGCCTGTT AAAGATAGTA AAGTCACTGG AGCTTCAGCC AAATCCGCAG CACCTGATAA AACCGGTGCG ATGCGTGCCG GTGGAGAGCG AACCGCTGCC TGGAGCAGTG AGACCGATAA CGACGCTCCA TTAGGTACAG CGGCCTTCAA GAAGGCCGAA GGGAATAACA GTTTTATTCA GCCTGTGCGT CATACAGAAG AACGAGCCGC GAGCAGCACT CCTAAAGCGA ACAGCACCTC TCGCGTCGAT CTTGCTCCAC AGATTCCTTC ACTGAATGTG GAGTGGGTCC GCAGATCCGA TATCAACGTC GGTCAAGAAT GCACGGTCGA TCTGATTGTT CGCAACACGG GGACAACGAC AGCGTCAAAA GTTTCGGTTG ATGGCTTTTT CCCGACAACC GTTCGCTTGA CCAGTGCTGT GCCAAAACCA GCGACCATTA CCGATCATCT CACTTGGAAC ATCGAAGCGA TTCCTGCCGG TAGTGAGTAC AAAGTTACCA TCAAGATGAT TCCCAGCCGT CGTGGCGAGC TCGCAACGAA CGCCACTGTC CGCCTGACAG GTTCGGCTTC CGCTGCCTTC CGCGTGGAAG AGCCTTTGCT CAAGGTCGCA CTCAAGGGGC CATCAGACAT CATGGTCGGT GATCCTGCAT CACAGACAGT GGTGATTTCT AACCCTGGCA GCGGTATTGC TCACGATGTC AAGCTCGACG TCACGTTGAG CGAAGGGCTC GAATGCAGCA AGGGTAGTCA GTTTGTCATG GATGTGGGTT CGATCAATGC GGGTGAATCT CAGACGATTC GACTCCCTGT GGCTGCTGTC AAAGGTGGCC GTCAAACTGT GACGGTCGTT GCCACCAGCA CCTCGGATGC AGGTCATACC GCATCGTCTG TCATCAATGT TCTCGCACCT GCACTTCAGG TCGCCATCGA GGGGCCTGGC TTGCGATACA AAGGTCGTAA TGCCAAGTAT GTCGTGACAG TCAAGAACGA CGGAAGTGTC CCGACCACCA ATGTACGTGT CACTCAGAAT GTGGCTGAAG GCTTTGAATT TGTATCGGCA GATAAGGGTG GAAAGTTCGA TTCCAGCCGC AATCAGGTTT CCTGGCTCGT GAGTCGGATT GAGCCGAATC AATCTGTCAA TCTGATCTGC GAATTGACTG CCAATGCTCT GGGTTCGTTT GCCATTACCG CTCAGGCTGC CAACGACACC GCCTCCATGG TGGAAGCCTC AACAACAACG AACGTCGAAG GTTCTTCAGC ACTCTCGATG AAGGTGATCG ATCTGGATGA TCCTGTCGAA GTGGGTGGCG AAACAGCCTA CGAAATTCGA GTTTCCAACG AAGGGACCAA GGCCGCGACA GGTGTCACTG TCACTTGTGA TCTGCCCGCC GGTCTGGAAT TGATCAATGC CCGGGGTGCG ACAGAAGGCA TCAGCGATGG TCGCATCGTC GGCTTCAAAC CACTGGCCAG TCTGGCTCCA GGAACCGAAG CGATCTTCCG AGTTCATGTT CGCAGCACAC AGGAAGGGAA TCTCCGCTTC CGGGCCCGCG TCACCAGCAA CTCGATCGAA GAACCACTGC TGATCGAAGA ACAAACCAAG TTCTACTCAG ACGTTCGTCG CTAA
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Protein sequence | MPRRVWVLAM SAAAALAPSL CPAAETSTTK PAGRIAATPS ADVPTKYSRT QPAQAGAGTS STSSSKYSEL FGEAPKATPV KDSKVTGASA KSAAPDKTGA MRAGGERTAA WSSETDNDAP LGTAAFKKAE GNNSFIQPVR HTEERAASST PKANSTSRVD LAPQIPSLNV EWVRRSDINV GQECTVDLIV RNTGTTTASK VSVDGFFPTT VRLTSAVPKP ATITDHLTWN IEAIPAGSEY KVTIKMIPSR RGELATNATV RLTGSASAAF RVEEPLLKVA LKGPSDIMVG DPASQTVVIS NPGSGIAHDV KLDVTLSEGL ECSKGSQFVM DVGSINAGES QTIRLPVAAV KGGRQTVTVV ATSTSDAGHT ASSVINVLAP ALQVAIEGPG LRYKGRNAKY VVTVKNDGSV PTTNVRVTQN VAEGFEFVSA DKGGKFDSSR NQVSWLVSRI EPNQSVNLIC ELTANALGSF AITAQAANDT ASMVEASTTT NVEGSSALSM KVIDLDDPVE VGGETAYEIR VSNEGTKAAT GVTVTCDLPA GLELINARGA TEGISDGRIV GFKPLASLAP GTEAIFRVHV RSTQEGNLRF RARVTSNSIE EPLLIEEQTK FYSDVRR
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