| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1120 |
|---|
| Symbol | |
|---|
| ID | 9137807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 1421203 |
|---|
| End bp | 1423728 |
|---|
| Gene Length | 2526 bp |
|---|
| Protein Length | 841 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1549 |
|---|
| Protein accession | YP_003629154 |
|---|
| Protein GI | 296121376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCG AGTTTATCCA TCCCATGTCG CACTATCCTG TCCTCAAATT TGTCCCTCAC
GTCATGCCTC GAAATGGCAT TGCGTTGCTT CGTGGGTTGT GTTGGGTCTG CCTCGCATTC
GCCATCTGGC TCTGCTCACC ATCGACGTCT GCATTTGCTC AGGTTGATTT TGCGCATCAG
ATCGTCCCGA TTCTCCGCAA ACACTGCGTG GAATGTCATT CCGGGACAAA AATCAGCGGC
GGCCTCTCAC TCAATGATCA GGCAACGTTT CTTCAAGGCA GTGAAAACGG TCGTATCGTC
GATTTCGCAC AGCCCGATAA AAGTCTGTTA CTCCATGTGG TCACCACGGA CGACACCGAT
TTCCGCATGC CTCCGAAAGG CCCGGGGCTC ACAAAAGAAG AAGCCGCTCT GCTCCGCCAG
TGGATCAAGG AAAAGGCACC CTGGGAACCT GGCTTCGCCT TCACCAGGCC CGCTTATGAA
CCTCCTTTAA AGCCACGAAA AGTGGAATTG CCCCCCATTC TGAATGGCCG GGCTCATCCC
ATTGATCGTC TGGTCGATGC TTCATTTGCC AGCAGACAAA TCGAGCGCCC CGCCGGCATT
TCCGATGGTG AGTTTCTCCG TCGTGCCTCA CTCGATCTGA TTGGCTTGCT CCCCACACCG
GAAGAATATG CCGCGTTCAT GGCTGATCAT CATCCGGACA AACGCACGCG GCTCATTCAA
TCGTTATTGA ATCGGGATGT CGATTACGCC GAACACTGGC TCAGCTTCTG GAACGACTTA
CTACGCAATG ATTACAGCGG CACCGGCTTC ATCACGGGGG GACGCAAACA GATCAGCAGT
TGGCTCTATG AATCACTCCT CAACAATCTC CCCTACGATC AATTGGCCCG TGAACTCATC
GCACCACCCA ACCCTGAAAG TCGTGGCTAT ATCGATGGGA TTACCTGGCG CGGCACAGTC
AGTGCCGGTC AGACCGTCGA GATTCAATTT GCTCAAAGCG TGGGCCAGTC CTTCCTGGGC
ATCAACTTGA AATGTGCTTC CTGCCACGAC AGTTTCATCG ATCGCTGGAA ACTGGATGAA
GCCTATGGAC TCGCCGCCAT CTACTCGACG AGACCCCTGG AGATCCATCG CTGCGACAAG
CCCACAGGCC GTATGGCGAA GGCCTACTGG CCCTTCCCGG AACTCGGGCA AGTCGACGCT
GCCGCTCCGC GTGAAGAACG ACTGAAACAA CTGGCCAACC TCATGACGCA TCCCGAAAAC
GGGCGTTTCA CACGGACGAT CGTCAATCGT TTATGGCATC GCCTGATGGG CCGTGGCATT
GTTCACCCTC TCGATGCCAT GCAGAGCGAG CCCGAGAACG CCGACCTGCT CGATTATCTG
GCCAATCATC TGCAGGAGCA TCAATACGAT CTCAAGCAGA CACTGGAGTT CATCGCCACC
TCGGAAATTT ACCAGGCAAA AGCCGCATCC GTTTCCGAAG AATCGATGCA GGCGAACTTC
CACGGCCCGA GAGCCAGACG CCTTTCCGCC GAGCAATTCG TCGATGCCGT CTGGCAACTC
ACCGGCACTG CTCCCAAAAA GCCTGATGCC AACGTCGTGC GAGGCAAACT CGATCCCTCT
CTGCTGGAGG CCACAGCCCA GGCCATGACC GCCGCATGGA TCTGGGGAGA CTCTGCGCGA
GATGGCAAGT CTCCACCAGC CAACGAAACG CTCACCTTCC GCACCACCAT CAACCTGCTC
GAAGTGCCTC ACAAAGCAGC GGCGATCATT TCCTGCGATA ACGAGTACAC CATCTATTTG
AACGGCAAGA AGCTGGGCGA TGGCAAAAAC TGGGAAACTC TTGGTAGCTA TTCACTGACC
TCCGCCCTCA AGGCCAATCA ACCCAATGAA CTGCTGGTCG TCGGCAAAAA TGCGGGAGCA
GGCAACAATC CCGCCGGTTT GTTTGTGGAA ATACAACTCA TTCAGAAAGA CGGCAGCCGG
CAGCACATTG GCAGCTCGAC CCAATGGGAA TGGAGCCCCA CGCTCCCGGA CGCCAAAGGG
AAATACGCCC AGCAGCCGAC CGACTGGAAA CCAGCCGTCA AAGTCCCGGC ACTCGATGTC
TGGACGCAGC GTACCATGCA GCCCGCCATC AACCGTCTCG TCGAACTCAA CTTTGATCAA
GACCACATGG TCCGCAGCTC GCTGGTGAAA AGTGATTTTC TCATGCGTTC CCTCGGACGC
CCCAACCGCG ATCAGATTGT TTCCATGAGG CCCAATGATC TCACAACGCT CGAGGCGATT
GATCTCTCCA ACGGAGAAAC ATTAGCAACG GCTCTGGATC AAGGTGCCAG GTTGCTTCTG
GAAAAAGATT TTGCCACAAC TCCCGAACTG GTCAATTGGA TCTATAGCTA CGCACTTTCC
CGGCCGCCAA CAGAAACGGA ATTAGCAACC ACAGTGGCGG CTCTGGGTGA CGAACCCACC
CGGGAAAACG TGGCCGACCT GCTCTGGGCC ATCCTGATGC AACCCGAATT TTTCTATGTC
AATTGA
|
|---|
| Protein sequence | MPAEFIHPMS HYPVLKFVPH VMPRNGIALL RGLCWVCLAF AIWLCSPSTS AFAQVDFAHQ
IVPILRKHCV ECHSGTKISG GLSLNDQATF LQGSENGRIV DFAQPDKSLL LHVVTTDDTD
FRMPPKGPGL TKEEAALLRQ WIKEKAPWEP GFAFTRPAYE PPLKPRKVEL PPILNGRAHP
IDRLVDASFA SRQIERPAGI SDGEFLRRAS LDLIGLLPTP EEYAAFMADH HPDKRTRLIQ
SLLNRDVDYA EHWLSFWNDL LRNDYSGTGF ITGGRKQISS WLYESLLNNL PYDQLARELI
APPNPESRGY IDGITWRGTV SAGQTVEIQF AQSVGQSFLG INLKCASCHD SFIDRWKLDE
AYGLAAIYST RPLEIHRCDK PTGRMAKAYW PFPELGQVDA AAPREERLKQ LANLMTHPEN
GRFTRTIVNR LWHRLMGRGI VHPLDAMQSE PENADLLDYL ANHLQEHQYD LKQTLEFIAT
SEIYQAKAAS VSEESMQANF HGPRARRLSA EQFVDAVWQL TGTAPKKPDA NVVRGKLDPS
LLEATAQAMT AAWIWGDSAR DGKSPPANET LTFRTTINLL EVPHKAAAII SCDNEYTIYL
NGKKLGDGKN WETLGSYSLT SALKANQPNE LLVVGKNAGA GNNPAGLFVE IQLIQKDGSR
QHIGSSTQWE WSPTLPDAKG KYAQQPTDWK PAVKVPALDV WTQRTMQPAI NRLVELNFDQ
DHMVRSSLVK SDFLMRSLGR PNRDQIVSMR PNDLTTLEAI DLSNGETLAT ALDQGARLLL
EKDFATTPEL VNWIYSYALS RPPTETELAT TVAALGDEPT RENVADLLWA ILMQPEFFYV
N
|
|---|
| |