Gene Plim_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1029 
Symbol 
ID9137715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1298265 
End bp1299407 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003629071 
Protein GI296121293 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGTTC TATCTTACCT GCCCATCCGG TGGTTCAAGT CTCATTGGTT CTGGCTGAAG 
TGGCTGCTGG CGGCGGCCCT GATGTCGTGG CTGGTTTCTT CCAACTGGAA GAACCTCGCG
AATCTGAGTG AGCGGCAAAT TCGCTGGGAT TTCTTCGCAC TCGCTTTTGC CACCTGTTTA
ATTGGTGTCG TCCTGACGTT CTTCCGCTGG TACCTGCTGG TGCGAGCTGT GGATCTCCCG
ATGACACTCA AAGAAGCGTT TCGTCTGGGT TCTTTGGGGC TGATGTGTAA TTACATTGGG
CCGGGTGCCG TGGGTGGCGA TCTCATCAAG GGGATGATTC TTGCCAAAGG GCATCCGGAA
CGTCGGGCGG CGGCGGCGGC TTCCGTGATC TATGACCGCG TGCTGGGTCT GGTGGCACTG
GTGATTGTGG GTGCTGCTGC GGCACTTCTG CCCACGACGT TGCCCTTCAA CGCTCAGTTA
CAACTCATCA TGACGTTGAC GTGGGTGGCG GCCGGTGCCG GTATTCTTGG CCTGGTGGTG
ATTCAATCTC CTTTTCTTCA TCGCTACCAC TGGGATCGAT TTTTCAGCCG CTTTCCGGTG
GGTGGCAAGT TGGCCCATCA GTTGTTTCAG GCGGCCACGC TCTACAAAGA CCGAACTTCG
ACCATTCTCG CCTGTATCGG GATCAGCATT TTCGGACATC TTTTCATGCT GTTTTCCTTT
TACCTGTGCG CAGAAACCAT TCGCGGGAAT GATCCCATTC CGGATCTTGT CGCTCACTTA
AGGTTTATCC CCGCTGCGGA AGTCTTTGGT GTGCTGATTC CGACACCGGG TGGAATGGGT
GCACTGGAAG GAGCGATCAA AGCGTTTTAC TCGCTGACGG TCGATCCGAA TGATGCTGCT
GCCGTGGCTC GTGCTGCGGG GAATGGGCTG CTGATGGCGA TCACCAGCCG GGTGATTCAA
GTAGCGATCT CGGCGATTGG ATTGATCTAC TATTTTGCGG CACGTCGGGA ATTTGAGGCT
TTACCATCTT TGGATGAAAA CCCGGATTCT GAGACAGAAA GTCCGCAGGA TCCCCACCAG
GTGGTCATTT CCTCAATCCT GACCGATCCC CCCTCGTTGA CAGAGCCAGC AGCACCACGC
TAG
 
Protein sequence
MSVLSYLPIR WFKSHWFWLK WLLAAALMSW LVSSNWKNLA NLSERQIRWD FFALAFATCL 
IGVVLTFFRW YLLVRAVDLP MTLKEAFRLG SLGLMCNYIG PGAVGGDLIK GMILAKGHPE
RRAAAAASVI YDRVLGLVAL VIVGAAAALL PTTLPFNAQL QLIMTLTWVA AGAGILGLVV
IQSPFLHRYH WDRFFSRFPV GGKLAHQLFQ AATLYKDRTS TILACIGISI FGHLFMLFSF
YLCAETIRGN DPIPDLVAHL RFIPAAEVFG VLIPTPGGMG ALEGAIKAFY SLTVDPNDAA
AVARAAGNGL LMAITSRVIQ VAISAIGLIY YFAARREFEA LPSLDENPDS ETESPQDPHQ
VVISSILTDP PSLTEPAAPR