Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0873 |
Symbol | |
ID | 9137558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1121179 |
End bp | 1121862 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Haloacid dehalogenase domain protein hydrolase |
Protein accession | YP_003628916 |
Protein GI | 296121138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACTC GACGCGGGAC TGTGCTGTTC GATATTGATG GGACACTCAT CGATGCTGGT GGAGCCGGAC AGGCTGCCAT GGAAGATGTC TTCCGTGAAG AATTTCGCAC GCTGAAAGAA GTGACAGGAA TTCCCACAGC TGGGCGAACG GATCGTGCCA TCACGCGTGA TCTCTTTGCG TTTCATGGTG GTGAGTGTGA TCCACTGAGC CTAATGAAAC TGCGCGATCG ATATCTGGCC CATCTGCCAA AATATCTCGA AACACATGCT GGGGGGCTCT TACCGGGAAC GGTGGAAATT CTCAGCCAGC TTTCGCATTC GGGGGAATGG CGGTTGTCGT TGCTGACAGG CAACTTCGAA GAAGCTGCCT GGATCAAACT GCGTCATTAT GGGATCGACC ACCATTTTTC CGATGGCGGT TTCGGTGATG AACATGTCGA TCGCGATGAT GTCGCGCGAT CCATCTGGAG TCGCCTCACA GGTGATGAAC CTCAATTGGA ACGTTTGCCG GTGATCGTCG TGGGAGACAC TCCTGCCGAT GTGAAATGTG GTCGCGCAAT TGGTGCCCGA GTTGTGGCTG TAGCGACCGG CGTTTATGGG CGTCATTCGC TGGAAGCTGC AAAACCCGAT TGGTTGATCG ACAATCTGCA CGACACCCGC TGGCTGCAGG AATTGCTGGC ATGA
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Protein sequence | MPTRRGTVLF DIDGTLIDAG GAGQAAMEDV FREEFRTLKE VTGIPTAGRT DRAITRDLFA FHGGECDPLS LMKLRDRYLA HLPKYLETHA GGLLPGTVEI LSQLSHSGEW RLSLLTGNFE EAAWIKLRHY GIDHHFSDGG FGDEHVDRDD VARSIWSRLT GDEPQLERLP VIVVGDTPAD VKCGRAIGAR VVAVATGVYG RHSLEAAKPD WLIDNLHDTR WLQELLA
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