Gene Plim_0741 details

Gene Information

• Locus tag: Plim_0741
• ID: 9137424
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 963844
• End bp: 965796
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 54%
• Product: ABC transporter related protein
• Protein accession: YP_003628786
• Protein GI: 296121008

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCACCCG CTGCTGTCGA TTCCCGCCCA AATACCGCTA ACGAAGCACA GGCTCCAGCC 
CGTCATCTCG TATTGAGGCT GCTCGGCCTG GCGTGGCGAT ATCGCAAAAA ATGTCTGGCT 
GTGGTCTTCC TCAATGGATT TGTCGCCATT CTGGGACTGG TGGGATTTCA ACTCACGGGG 
TTAGGGATCG ACGTCTTACG AAAGGCTGTG GATCCGGCGG CTCCGGCTGT GCGCTGGCCT 
CTGGGCTATG CACCACCCGA GAGCTGGTCA CTGGTGGCAG AATTGTCAAC GGTCGCTGTC 
ATGATGGCGT TGATGGCGGT TTTGTCCCTG GCGATCAAAT ACTGGGCGGC GATCGTATCG 
GCCCAACTGA GCCAGCAGAT TGTGATTCAA TTACGAACCG AGGTTTACGA CAAACTGCAG 
AGATTGTCGT TTCGGTACTT TGACGACCAT GACAGCAGTT CGCTGATCAA TCGAGTGGCG 
GGTGATGTCC AGGCCATCCG GCAGTTTGTG GATGGTGTGG TCATCAAGTG CCTGGTGGTG 
GTGATCACAC TGGCTGTCTG CATTGTCTAT ATGCTGCGGT TGAATGTCGG CCTGACGATT 
GCCTGCCTCG CGACGACACC ACTCTTGTGG TGGGGTGCCA TCTGGTTTGC CCGGGTGTCG 
CGCGAGCAGT ATCTCGAGGC CAGCAAACTG GGCGACGAGA TGGTGCGGGT TCTTTCCGAG 
AATGTGCAGG GCATTCAAGT CGTGAAAGGC TTTGCTGCCG AAGAGGGACA GATCGAGCGA 
TTTGCCGAAG CCAACCGCAG GATTGTGGAA CATAAGTTCG GGATCTTCTG GAGCCTGAGC 
CTCTATCAGC CCATCATGGG GATTCTCACG CAGATCAATA TGCTGGTGCT CATCGGGTAT 
GGCAGTTATC TGACGATTCG TGGCGAATTG CCTCTCGGAA CGGGGTTATT CGTCTTTGCC 
AACCTGCTGC ACGAATTTGC CAACCAGGTG GGCCATGTCA CCAATATTGC CAACAGTATT 
CAGAGCAGCT TGACCGCTTC GGAACGTGTA TTCGAGATAC TCGATGCGCC ACTCGAAGTC 
GATTCTCCCG CATCGCCACA GCAGCCAGTT CAAGTTCGTG GAGAATATGT GCTGGAGCAG 
GTGAGCTTCG AATATGTTCC CGGCAAGCCT GTGCTCAAAG AGATCAACCT GCGGATTGGT 
TCGGGCCAGA TGGTGGGGAT CACCGGAGAA ACCGGTGCGG GAAAAACGAC CTTACTGGCT 
TTGTTGACCA GGTTTCATGA TCCGACTTCA GGCCGCATAT TGCTCGATGG TGTCGATTTG 
AAAGCGTGGG ATCTGCCTCT TTTGCGACGA CAGATCGGGA TGGTCTTTCA GGAAAGTTTT 
CTATTCAGCA ATACGGTCTC GAACAATATT GCCTTTGGTA AGCCCTCGGC GACTCTCGAT 
GAAATCGAAT TTGCGGCCCG CCAGGCGGCT GCGGAAGAAT TTATCTCGGC CATGCCCGGG 
CAATACCAGA ACGTGGTTGG TGAGTATGGC ACTAACCTTT CGGGTGGTCA GAAACAGCGA 
ATCTCACTGG CGCGTGCGTT GATCCTTCGT CCGCCGGTCC TGATTCTTGA TGACGCCACA 
GCGGCTGTGG ATTCTGAAAC CGAGCATGCC ATCCAGCAGA CGCTTGATCG ACTTCGCGGC 
GAACGAACAG TCATTCTCGT TTCGAGTCGA GTCAGTACGT TAAGACATGC AGATCAGATT 
TTTGTGCTGA ATGCCGGGAT GCTGGCTGAA ACGGGCAATC ATCAGGAATT GATGCAGAAG 
CATGGCCATT ACTTCCAGAT GGCCCAATTG CAGGCGTGGG AACAGACACT GACTGAGCCT 
GAAGATTCGT TACCAGAGGA TCGTGAAGCC AGTTCGTGGC CCAGTGCGCA AGGAGCGGCC 
TTTCCGCAAA CGAAAGGGAT CCGCAACGTA TGA 

 

Protein sequence

MSPAAVDSRP NTANEAQAPA RHLVLRLLGL AWRYRKKCLA VVFLNGFVAI LGLVGFQLTG 
LGIDVLRKAV DPAAPAVRWP LGYAPPESWS LVAELSTVAV MMALMAVLSL AIKYWAAIVS 
AQLSQQIVIQ LRTEVYDKLQ RLSFRYFDDH DSSSLINRVA GDVQAIRQFV DGVVIKCLVV 
VITLAVCIVY MLRLNVGLTI ACLATTPLLW WGAIWFARVS REQYLEASKL GDEMVRVLSE 
NVQGIQVVKG FAAEEGQIER FAEANRRIVE HKFGIFWSLS LYQPIMGILT QINMLVLIGY 
GSYLTIRGEL PLGTGLFVFA NLLHEFANQV GHVTNIANSI QSSLTASERV FEILDAPLEV 
DSPASPQQPV QVRGEYVLEQ VSFEYVPGKP VLKEINLRIG SGQMVGITGE TGAGKTTLLA 
LLTRFHDPTS GRILLDGVDL KAWDLPLLRR QIGMVFQESF LFSNTVSNNI AFGKPSATLD 
EIEFAARQAA AEEFISAMPG QYQNVVGEYG TNLSGGQKQR ISLARALILR PPVLILDDAT 
AAVDSETEHA IQQTLDRLRG ERTVILVSSR VSTLRHADQI FVLNAGMLAE TGNHQELMQK 
HGHYFQMAQL QAWEQTLTEP EDSLPEDREA SSWPSAQGAA FPQTKGIRNV