| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0656 |
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| Symbol | |
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| ID | 9137336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 850828 |
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| End bp | 852747 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003628702 |
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| Protein GI | 296120924 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.329411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGC GACCATCAGC ATCTAGCCGA TCATCCGTTC TACCGGCCGA GGAACTGGCG
ATTGGAAGTC AAAAGCCCAT TCATCAAGCA CCGCTTGAGC CCGCTCTATT GAGTTTCTGC
AACTCTTGGT GGCTGGCAGT TTTCCTTCTT CTGACAGCCG TGGCAGTGGC CTATGCCAAC
ATTGGCTCCG CAGATTTCGT CTTTGATGGC CGGCTTTTTA TTCTCTCCTA CAAGCCCGTT
CGCGCTCTCT GGCCTCCAGA ATACCTCTGG TCGTCAACGC GCCCCGTTGT CTTTTTCACC
TTTGCCCTCA ATTATGCACT CAGTGGAGAA CAGATCTGGA GCTATCAGGC CGTCAACCTG
TGCATTCATC TTATCAATAC GCTCCTCGTC TATGTTCTCA CTCGACTCGT GATTGAACGA
AGTCCTCATT CCGATCCGCG CATGATTTCG GATAGCTGGT GCATTGCTCT TTGCACGGCC
GCTCTCTGGG CTCTTCATCC CTTGCAGACA CAAGGCGTCA CCTACACCTA CCAGAGGCTC
GAATCACTCA CCTCTTTATG GTACCTGGCA TCGCTGGTGG GGTTTGTATT GGCCGTCACT
TCCCGGAAGA AAATCTTGAT TCTGGGAACA ATTCTCTGCC TGCTGCTGGG GATGGCCTCG
AAGGAACTGA TGGCGACAGC ACCTCTGCTG ATTCTCTGGC TCGACCGCGT CTTCTTTTCA
AAGTCGGTTC GCGAACTCGT AATAACTCGC TGGAAACTTC ATCTCTGCAT CTGGTCCACA
CTGATTTTCC TCTTCGGAAT CATGTGGGCT CATCGCGAAA ACTACGATGA TGGCGGAATT
GGAGTCATCC AGAAGGGAAC CCCCTGGCAA TATCTGATTA CTCAACCCAG CGTGATATTC
CAATACCTCA AACTTCTGTT TTGGCCCGAT GGTCAGGCGT TAGACCCCTG CTGGCCCTGG
CGAATGTCAC TTTCCGAAGC CTGGCCGGAA GTTTTACCAT TTGCACTCGG ACTCTGCCTG
ATTGTTTTCT TAATGGTTCG ATTCCCCAGA ACTGGCTTTC TTGCCGGGGG ATGGCTCCTC
GTGCTGGCTC CTACATCCAG CATTGTGCCG ATTGCTGATG CCTATTTCGA GCATCGCATG
TATTTGCCAA TCGCCTTCCT GGCCGCAGGG TTTGTCCTGG CGATCTATCA GCTCGCTCGA
CTGGCCACAG ACAAACTGAA GCTGCCTCAA CAGTCACCAG CAGGGATCAG CTTACTTGTC
TGCCTGCCGA TTGCTGTGGC CCTGGGCTGT GTGACCTATT CACGGAACGC GGTCTACACG
TCGGAAGAGG CCGCCTTTAT GGATACGATT CAAAAGTATC CCGATGCTGC CAGGCCGCGA
TCTTCACTCG TTCGCAATTA TCTGGCAGAC AACCGTCTCG AAAAAGCGGC TACGCATGCG
GCTTATCTCG TCAGAAACTA TTCACGGAGT GCCGAATCTT ATGCCGACTT CGGACTCGTG
CTTCTCGCAA TGAAAATCCC CGAAGATGCG GCTGTAATGT TTCGCAAAGC CCACGAACTT
GATCCCAAAA ACAGCCTGCA TCTGCTGAAT CTGGGCGATG CACTCGTCGA AGTCAATCCT
CAGGAGGCTG TGGTCGCTCT CCAGAAATCG GCAGCTCTCA AGCGAGATCA TGTCGATACT
TGGTACAACC TCGGAAGAGC GTATGTCCGT TTGAATGATC TCCCCAAGGC GGAGGCAGCC
TTGAGGGAAG GATTAACAAT TCCCGGCCCG AACTTCGCCA CCCGCGAGCT TCTCGCCGAT
ATCCTCCTCG CCACCGACCG GCGCGAGGAG GCGATCGACA TTTTGAACTC ACTTCTCAAA
GACAAGCCTG AGAGTCGCGA AGTTCTCCAG AAGCTCCAGC ACGCTACCAC CAACCCTTGA
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| Protein sequence | MPQRPSASSR SSVLPAEELA IGSQKPIHQA PLEPALLSFC NSWWLAVFLL LTAVAVAYAN
IGSADFVFDG RLFILSYKPV RALWPPEYLW SSTRPVVFFT FALNYALSGE QIWSYQAVNL
CIHLINTLLV YVLTRLVIER SPHSDPRMIS DSWCIALCTA ALWALHPLQT QGVTYTYQRL
ESLTSLWYLA SLVGFVLAVT SRKKILILGT ILCLLLGMAS KELMATAPLL ILWLDRVFFS
KSVRELVITR WKLHLCIWST LIFLFGIMWA HRENYDDGGI GVIQKGTPWQ YLITQPSVIF
QYLKLLFWPD GQALDPCWPW RMSLSEAWPE VLPFALGLCL IVFLMVRFPR TGFLAGGWLL
VLAPTSSIVP IADAYFEHRM YLPIAFLAAG FVLAIYQLAR LATDKLKLPQ QSPAGISLLV
CLPIAVALGC VTYSRNAVYT SEEAAFMDTI QKYPDAARPR SSLVRNYLAD NRLEKAATHA
AYLVRNYSRS AESYADFGLV LLAMKIPEDA AVMFRKAHEL DPKNSLHLLN LGDALVEVNP
QEAVVALQKS AALKRDHVDT WYNLGRAYVR LNDLPKAEAA LREGLTIPGP NFATRELLAD
ILLATDRREE AIDILNSLLK DKPESREVLQ KLQHATTNP
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