Gene Plim_0612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0612 
Symbol 
ID9137292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp792524 
End bp793135 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content53% 
IMG OID 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_003628658 
Protein GI296120880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTCTCA CCGGGAATGA AATTCGTTCG CAACTGGGTC GTAATCTCGT CATCAATCCG 
TTCGAAGAGC GTCTGCTCAA CCCGAACAGC TACAATTTGA GATTGCATGA TGAGTTACTG
GTCTACGAGG AAATCGTCCT CGATATGCAG CGGCCCAATC GCTACCGCCG GCATGTCATT
CCTCCCGAAG GACTCGTGCT TCAACCGGGA CAACTCTACC TGGGGCGGAC CATCGAATAC
ACGGAGACGC ATAACTTCGT GCCCATGCTC GAAGGCCGGT CTTCGGTCGG ACGACTGGGA
TTATTTGTCC ATGTGACGGC AGGCTTTGGC GATGTGGGAT TCTGCGGTTA CTGGACGCTT
GAAATGTTCG CGATCCATCC CATTCGCATT TATGCCGGCG TCCCGATCTG CCAGATTTTC
TACCATCAAC TGGAGGGAGA CATCACGGAG TACGCCAGCG ATAAGTATCA GAGAAATCAC
GACATCCAGC CAAGCCTGTT GTTTAAGGAG TTTCGGGAAC CCGAGCCTGA TCAGCAGCTC
AGGCTGGCCT TTGGTCAGGA ATGCTCGACC CGTGAAGATG CGGATTGTTC GACTCCCACC
GATCGAAAAT GA
 
Protein sequence
MILTGNEIRS QLGRNLVINP FEERLLNPNS YNLRLHDELL VYEEIVLDMQ RPNRYRRHVI 
PPEGLVLQPG QLYLGRTIEY TETHNFVPML EGRSSVGRLG LFVHVTAGFG DVGFCGYWTL
EMFAIHPIRI YAGVPICQIF YHQLEGDITE YASDKYQRNH DIQPSLLFKE FREPEPDQQL
RLAFGQECST REDADCSTPT DRK