Gene Plim_0250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0250 
Symbol 
ID9136905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp319067 
End bp320371 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003628301 
Protein GI296120523 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTGTC TCTTGACTGC CCGCCTTCGC TTGTCCGCCA GTTTCTCTTC CCGCTCTTTG 
TGCCAGTTTC TAGGTGTGGC CAGTCTGCTG GTCATGCTGA GTGTCTCTTT CTCAAAGACC
AGGGTGCTGG CAGCGGATTG GCCGCAGTTC CGTGGTCCTT CGGGCGAAGG CCTGAGTTCC
GAAACGATGC TCCCCATCGA ATGGAGCGAA GAGAAGAACA TTCGCTGGAA AACCGAGATC
CCTGGCCGTG GCTGGAGTTC CCCCGCACTG CGTGATGGCA AAATCTGGCT GACAACCGCC
GTCGATGACG GCAAGCAGTT GCGGGCCATT TGCGTCGATG CCGCCCAGGG CCAGATTCTG
CACGATGTCC TCGTTTTTGA ACTCGACGAT CCTGGTGCCA TTCATTCCAA AAACTCGCAT
GCCTCACCCA CGCCTTGGAT TGAAGACAAT CGCATCTATG TCCACTTTGG TGCTCATGGC
ACTGCTTGTC TCGACCCGTC CGGGAAGATC CTCTGGAAGA CCAAACTCGA ATACGATCAC
CGGCACGGGC CAGCGGCATC ACCAGTGGTG GTCGATCAGT TGCTGATCAT CAGTTGCGAT
GGCGACGACA AACAGTTCGT CGTGGCACTC GATAAACTGA CCGGCAAGGA AGTCTGGCGT
ACCAGTCGCG AAGGGGCCAT GGCCTATTGC ACTCCGCTAC TCATTCAAGT GCCGCTACCG
GATGGCACAA AGCAGGCACA GGTCGTGTGC CCGGGCGGAG AATGGGTCAT CGCCTATAAC
CCAAAAACTG GCGAAGAAAT CTGGAAAGTG CGATACCCCA AAGGGTATTC CAATGTACCC
CGGCCAGTCT ATGCCCATGG TCTCGTCGTC GTTTCGTCGG GCTATAACAC ACCGGTTGTC
TTTGCGATCG ATCCCACAGG TCAAGGCGAT ATCACAGAAA CACACGTGCG CTGGCAGATG
AAAAAAGGAG CTCCACTCAA TCCTTCGCCC GTCGTAGTGG GTGACGAAAT CTACTTCATC
AGTGACGGCG GCATTGCCAG TTGCGTTGAT ATGAAGACGG GGAAAGTTCA CTGGCAGCAG
CGGATCCCCG GGAACTACTC AGCCTCCTGG GTCTTTGCAG CCGGCAAGCT GTACATCACC
AATGAAGCCG GTCTCACCAC AGTCGTGAGA CCGGGAACCG AGTTTGAAGT TCTCGCCGAG
AACCCACTTC CAGGCCGCAC GCTGGCCACT CTTGCACCAG TTGATCAATC GATCTACTTG
CGAACCGATC ATCATCTGTA TCGGATTGAA GCACCCAAGC CATGA
 
Protein sequence
MVCLLTARLR LSASFSSRSL CQFLGVASLL VMLSVSFSKT RVLAADWPQF RGPSGEGLSS 
ETMLPIEWSE EKNIRWKTEI PGRGWSSPAL RDGKIWLTTA VDDGKQLRAI CVDAAQGQIL
HDVLVFELDD PGAIHSKNSH ASPTPWIEDN RIYVHFGAHG TACLDPSGKI LWKTKLEYDH
RHGPAASPVV VDQLLIISCD GDDKQFVVAL DKLTGKEVWR TSREGAMAYC TPLLIQVPLP
DGTKQAQVVC PGGEWVIAYN PKTGEEIWKV RYPKGYSNVP RPVYAHGLVV VSSGYNTPVV
FAIDPTGQGD ITETHVRWQM KKGAPLNPSP VVVGDEIYFI SDGGIASCVD MKTGKVHWQQ
RIPGNYSASW VFAAGKLYIT NEAGLTTVVR PGTEFEVLAE NPLPGRTLAT LAPVDQSIYL
RTDHHLYRIE APKP