Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0148 |
Symbol | |
ID | 9136802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 198769 |
End bp | 200559 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | carbon starvation protein CstA |
Protein accession | YP_003628199 |
Protein GI | 296120421 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGAATGT TAGGAATTCT CATCGGTGCG GCAATCCTCC TGTATGCCGC CTGGCGGCTC TATGGGCCGG TGCTGGCACG TCTTCTGGAA CTGGATAACA ACCGCCCCAC ACCAGCCGTC ACGCAGTGCG ATCATCTCGA CTACGAGCCG ATTGAACCCA ATGCACTGCT TTCACAGCAT TTTTCGGCGA TTGCCGCTGC CGGGCCGATT GTGGGCCCCA TTGTCGCTGG CATCGCGTTT GGCTGGTTGC CCGCCATTTT ATGGATTCTT GTCGGCGCCA TCTTTGTCGG GGGTGTGCAT GATATTACAG CTCTGGTCGC TTCGATCCGG CACAAAGCCC GTTCGATTGC CGAAGTTGTC CGCGAGCACA TGAGCCGTCG GGCGTTTCTG CTCTTTCTTT CGTTTGTCTG GCTGGCACTG GTCTACATTG TGGTCGCTTT TACGGATATC ACCGCGAGAG CTTTCGTCGG GCAGCTCGAT CTGGGGAATG GCGAAGTGGT GAGTGGCGGC GGGATTGCCT CGTCATCGCT GATCTATCTG CTGATCCCCA TCATCATGGG TGTGACCATG CGATACACGA AATTGTCGCT GGGCTGGGCC ACCATTATCT TTCTGCCGCT GGTAGGACTT TCGGTCTATG TGGGCCAGTT GATTCCGCTC GATATGGAAA GTCTGATGCT TCGCTTCGGC TGGGCCACGA CAGCCGACGA AGCCAAGTGG GCAGCGATTA TCACGTGGGA TCTGCTGCTG CTGTTCTATT GCTGCCTGGC TTCGATTGCC CCGATGTGGC TGCTATTACA GCCACGGGGT CATCTGGGCG GATACTTCCT GTATGTCGCT TTGATTGGTG GAGCTGCGGG CTTAATCGTT GGCAGCCTGT TGAATCAGCA GCCGATTCAA TACCCGATGT TCCGGGGTTG GCAACCACCG GAAGCAGGGA ATTTTGTCTT CCCGATGCTG TTCATTCTCA TTGCCTGTGG AGCCTGTTCA GGTTTTCATG CACTCATTGC CTCTGGCACA ACTTCCAAGC AGCTGCGTGT CGAATCTGAT GCCCGTGTCG TGGGTTATGG CGCGATGCTC CTGGAAGCGA TGGTGGCAAT TTTGTCGCTG GCGTGCGTGA TGCGGCTTTC ACAAACCGAC CCACTCTTAA CGAGTGGTAA ATTGGAGCCC AACGTGATCT ATGCCACGGG ACTGGGGAGT TTTCTGCAGA CGTTTGGTAT CCCGGCAAGC CTGGCGGTTT CGTTCGCTTT GATGGCCTTT ACCACCTTTG TTTACGACAC TCTTGATGTC TGTACGCGAC TGGGCCGGTA CATCATTCAG GAACTGACGG GCTGGCAAGG CTGGGGTGGC CGCTGGTTTG GCACCATCAT TTCCGCTGCA GCACCCGCCT TTTTTGTGAC TCAGCAAGTC ACCAACCTGC AAGGCAAAGT GGTTCCTTCG TGGGAAGTCT TCTGGCCCCT GTTTGGTGCC AGTAATCAAT TGCTCGCTGC TCTCACATTA CTCGGGGTGA CGGTATGGTT GTGGCAAACT CGCCGAGCCG CCTGGGTGTG GATTGTCACT GGCCTCCCCA CCGTGCTGAT GTACACGATG AGTCTCTGGG CTCTCGGTGT GATGACGAGT GGCACATGGC AGCAGATCCA GAAAGCGGAG AAGGTTGCGC CGGTCAGTTA TGTGATCATC ACGGTTTCGT CACTGCTGAT TGTGCTGGCA TTGCTGATGC TGATCGAAGC GATCATGGCT TTGACAACAA ACAACAAAGA GCGGGCCATT CCTGTGACAA CACCGGCCTG A
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Protein sequence | MGMLGILIGA AILLYAAWRL YGPVLARLLE LDNNRPTPAV TQCDHLDYEP IEPNALLSQH FSAIAAAGPI VGPIVAGIAF GWLPAILWIL VGAIFVGGVH DITALVASIR HKARSIAEVV REHMSRRAFL LFLSFVWLAL VYIVVAFTDI TARAFVGQLD LGNGEVVSGG GIASSSLIYL LIPIIMGVTM RYTKLSLGWA TIIFLPLVGL SVYVGQLIPL DMESLMLRFG WATTADEAKW AAIITWDLLL LFYCCLASIA PMWLLLQPRG HLGGYFLYVA LIGGAAGLIV GSLLNQQPIQ YPMFRGWQPP EAGNFVFPML FILIACGACS GFHALIASGT TSKQLRVESD ARVVGYGAML LEAMVAILSL ACVMRLSQTD PLLTSGKLEP NVIYATGLGS FLQTFGIPAS LAVSFALMAF TTFVYDTLDV CTRLGRYIIQ ELTGWQGWGG RWFGTIISAA APAFFVTQQV TNLQGKVVPS WEVFWPLFGA SNQLLAALTL LGVTVWLWQT RRAAWVWIVT GLPTVLMYTM SLWALGVMTS GTWQQIQKAE KVAPVSYVII TVSSLLIVLA LLMLIEAIMA LTTNNKERAI PVTTPA
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