Gene Plim_0129 details

Gene Information

• Locus tag: Plim_0129
• ID: 9136783
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: -
• Start bp: 176475
• End bp: 178478
• Gene Length: 2004 bp
• Protein Length: 667 aa
• Translation table: 11
• GC content: 54%
• Product: Protein of unknown function DUF1592
• Protein accession: YP_003628180
• Protein GI: 296120402

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.609629
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTCA GCCAGGGTTG GTCACGTCGA GATGTTGTTT CTTTTCGGTG CCGTCTGCAG 
TTGTTAATGC TCATCGTATG TTTTGGGCTT TTCACTTCGA TAGTTCATGG TGCCGATCCC 
GTGGCCTTTG ATCGCGATGC CAAGCCTTAT CTCAAGAAGT ATTGCTTCAG TTGCCACGAC 
GATAAAAAAA TGGAAGGCGA GCTGAATCTC GCTGTCTATA AAGAACCGCA GCGAGTGCTG 
GAATCGCTTC CGAAATGGGA GACGATTATC CAGCGCGTCA AAGCCAAAGA GATGCCTCCC 
GAAGGGAGCC CTCAGCCATC CGAGGAAGAG TTCCAACGAT TCTTGAGTTG GTATGGCACA 
CTCCCCCGGC CTGAGAACGA ATGCCGCAAT CTGGCGACCG ATGCCACCCA GAATTTTTAT 
CAAGGCTATG TGATGAGCCG CCGGCTCACA CGGGCCGAGT ACGCCAACAG CGTGCGGGAT 
CTGTTCAATT ACGACTTTCA GATTCTCTCT CGCATCCCGG CTGATGGGGC AGGTGGTGAA 
GGTTTTGATA CCAATGGCTC GTCGCTCTTC ACCTCAGCTA TTCTTGCAGA AAAGTATCTC 
GACGTCGCCA CCGATGTGGC CAGTCAGCTT CTTCCTGAAA GCTTGCGAGA ACAACCTGCT 
GCCATACAAC AACGCGAGTC CAGTCAATCC ATCGACCCAC TGGAAACCGC GAGGCGGAAG 
CTGCTGGCAC ATTGGCCGGG GGCTGCCTTA ACGCCGCGAG AAGCCGCACG ATTGAACCTT 
GAGCCATTCG TCAAAAGAGC CTACCGGCGA CCCATCCACA AGGAAGATCT AGAGCCGCTG 
TTGGCACTAT TCGATCAGGC ATATCAGAGG GGCGATCCTT TCCCACAGGC CATGCGATTG 
CCCTTGATGG CGATTCTCAT TTCGCCTCAT TTTCTGTTTC TGGCGGAGCC TGAGCCAAGT 
CAGGAAGGGG TGCATGCACT GCCCCCATAT CCACTGGCAT CGCGGCTCTC TTACTTTCTC 
TGGTCGAGTC TGCCTGATGA TGAACTTCTG CAACTGGCCG AATCGGGCCA ACTGCTTCAG 
GACGACGTGC TGAAGGCGCA AGTCCGACGC ATGCTCGCCG ATCCACGCGT ACGTGGTCTG 
GGTGAAAACT TTGGCATGCA ATGGCTGGGG CTATCTCAGT TCGGAGAAAC CACCCGGCCT 
GATGCGAAGC TGTTTCCCGA GTTTGACAGT GATCTACTCC AGGCCATGAG ACAGGAAAGT 
ATCGAGACTT TGACTGCGGT CTTCCGGCAG AATCGCAGTC TCCGCGAACT CCTGGTGGCC 
GACTATGTCT TTGTGAATGA TCGACTGGCA GAACATTATG GCCTGCCCAA GCCCGGCTCA 
AATGCCATGG TTCAGGTATC GCTCACCGAT GATCAGAAGT ACCGGGGCGG CATTGTGACG 
CAAGGGGCTG TCATGGTGCA CACTTCGTAT CCATTTCGAA CGAGTCCTGT CCTGCGGGGA 
CGATGGGTAC TTGAAGAAGT GCTCGGTAGT AAAGTCCCGC CGCCACCTCC CGGCGTGCCA 
CCATTGCCAG AGCACGATCC GAATGCTCCA CCATTGTCTT TGCGAGAGCG ATTGGAAAAG 
CATCGGCAGG ATCCGGCCTG TTCGGCCTGC CATAACCGCA TGGATCCATT AGGGTTCGGC 
CTCGAAAACT TCGATGTCCT TGGTCGATTT CGAACGGCTG AAGCAGGCCT TGCCATCGAT 
GCTTCTGGCA AACTTCCCAG TGGCGAAAAC TTCAGCGGCC CGGCCGAAAT GAAGCAGATT 
CTGCTCAAGC GGAAAGGGGA GTTTCTGCGG AATCTGACCA AGAAAATGCT CGGTTATGCC 
CTGGGACGTG GTCTCAACAA GTTCGACCAA TGTGTGATCA AGGAAACGCT CGAAGCCCTG 
AAATCCCATG ATGATAAGTC AGAGGTGCTT GTTGAGCAGA TTGTCCTGAG TTATCCGTTT 
CGCCACCGCT ACACCAAGAA GTAA 

 

Protein sequence

MIFSQGWSRR DVVSFRCRLQ LLMLIVCFGL FTSIVHGADP VAFDRDAKPY LKKYCFSCHD 
DKKMEGELNL AVYKEPQRVL ESLPKWETII QRVKAKEMPP EGSPQPSEEE FQRFLSWYGT 
LPRPENECRN LATDATQNFY QGYVMSRRLT RAEYANSVRD LFNYDFQILS RIPADGAGGE 
GFDTNGSSLF TSAILAEKYL DVATDVASQL LPESLREQPA AIQQRESSQS IDPLETARRK 
LLAHWPGAAL TPREAARLNL EPFVKRAYRR PIHKEDLEPL LALFDQAYQR GDPFPQAMRL 
PLMAILISPH FLFLAEPEPS QEGVHALPPY PLASRLSYFL WSSLPDDELL QLAESGQLLQ 
DDVLKAQVRR MLADPRVRGL GENFGMQWLG LSQFGETTRP DAKLFPEFDS DLLQAMRQES 
IETLTAVFRQ NRSLRELLVA DYVFVNDRLA EHYGLPKPGS NAMVQVSLTD DQKYRGGIVT 
QGAVMVHTSY PFRTSPVLRG RWVLEEVLGS KVPPPPPGVP PLPEHDPNAP PLSLRERLEK 
HRQDPACSAC HNRMDPLGFG LENFDVLGRF RTAEAGLAID ASGKLPSGEN FSGPAEMKQI 
LLKRKGEFLR NLTKKMLGYA LGRGLNKFDQ CVIKETLEAL KSHDDKSEVL VEQIVLSYPF 
RHRYTKK