| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0106 |
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| Symbol | |
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| ID | 9136760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 147516 |
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| End bp | 149861 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | DNA topoisomerase (ATP-hydrolyzing) |
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| Protein accession | YP_003628158 |
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| Protein GI | 296120380 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAGAAA ATCAGGAAGA CCGTATTCAG TTTCGGGAAA TCTCCTCTGA GACCCGGCGG
AGATACCTTA ACTACGCGAT GTCTGTCATT CAGTCGCGTG CTTTGCCCGA TGTTCGAGAT
GGTCTCAAAC CCGTCCAGCG CCGCATCCTC TACGTCATGT ACGAAGAATT GCGGCTGATG
GCCGATGCGA AGACGCGCAA GTGCGCGAAG ATCTCCGGCG ATACCACCGG CAATTATCAC
CCTCACGGCA ATCAATCGGT CTACGACACA CTCGTTCGCC TCGCTCAAGA TTTCACTTTG
AGATACCCGC TCGTCGACGG GCAGGGAAAT TTTGGCTCCA TCATGGGCCT GCCCGCTGCC
GCCGAGCGAT ACACCGAAGC CAGGCTGACG GGCATTGCCG AACAACTCAT GAACGAGTTG
CGGTTCGACA CTGTCGAAAT GCGGCCCAAT TATGACGGCA CCCGCAAAGA ACCGGTCGTC
TTGCCCACCA GGTTTCCGAA TCTGCTGGTC AATGGGACTG CCGGCATTGC CGTGGGGATG
GCGACGAATA TGCCGCCCCA TAACTTAAAA GAAGTGCTCG AAGCCTGTAT TCACCTCATT
ACAAATCCTG AGGCGTCTAC CAAGGAACTG CTCAAGTTCA TCAAGGGCCC CGATTTTCCG
TTGGGTGGGA GAATGATTAC CGATCGGAAA GCGATGCTCC CCATTTATGA GGAAGGGCGT
GGGGCTTTCA AGGTGCGGGC CGAATGGCGG ATGGATAAAG AGAAGCGGGC GGAAGTGGAA
GACCGGGTGG TGATCTATTC AGTACCTTAT GGCGTCGAAA CAGGGCCGCT GCTGGCAGAG
ATTGGCAATG TGATCGCAAG CCGCAAGCTG CCTCAACTGA TTAACGCGGC TGATGAAACC
GACGATAAAC ACGGCTTGCG TGTGGTTCTG GAACTGAAGA AAGGGAGTGA CCCGGAATCG
GTGATGGCGT TCCTCTATAA AAAGACGCCA CTGGAGCAGA ACTTCAACTA CAACAGCACG
GTCTTGATTC CGGATGATCA GGGGCTGTTA ACTCCAGCAC GATTGCCGCT CCATCGTTTG
CTGGGTGAGT TTCTCAAGTT CCGTTTGAAG GTCGTCAAGA AACGCTTCCA GTTTCAACTT
GATCAACTGC AGGCGCGGAT TCATATCCTG CGCGGCCTGG AGATCATCTT TAACGGGATC
GACAAGGCCA TCAAGATCAT TCGCAACAGC AACGGCAAGC GAGATGCCTG CGACAAGTTG
ATGGCGGCCT TTCCGCTCGA TGAACCGCAG ACCATGGCGA TTCTCGAAAT GCAGTTGTAC
CGCATTTCCC AGCTGGAAAT TGATACCGTC CTCGCGGAAC TGAATACCAA ACAGAAAGAG
GCCGACCGGA TCACACGCAT TCTTGCCAAA GACGATCGCA TCTGGAATGT CATCGAAGGC
GAACTGCGCG AGCTGAGTGA GCAGTTTGGC GATAAGCGGC GAACGACTTT GGGCTCTTCC
GACGAAGTCA CTGAGTTTGA TGAATCGCAC TATATCGTTC GTGAGAATAC GAATGTGGTG
CTCAGCAAAG ATGGGTGGAT CAAACGTGTC GGCCGGCTGC AAAGTGTGGA ATCGACGCGC
GTCCGCGAAG GCGACCAGGT GCTCGATGTC CTCCCAGGGA GCACGGTCGA TCATGTGATC
TTCTTTGCCA GCGACGGAAT TGCCTACACG ATGCCCATTT CTCAGGTGCC GGTTTCTTCT
GGGTACGGCG AACCACTCAC CAAGCATTAC AAGTTCAAAG ATGGTGTGCA GGTGATTGCC
GCCGTCACGA CAGACCCTCG CTTTACCGCG GTTGCCGAAG AGACAGCCGA AGGAGCCGAA
CCCGCACCGC CACATCTCTT TGTCACCACA GCCCAGGGGC AGGTGATGCG TGTGCCGCTT
CAGCCATTTC GCACAGCGAG CACGAGATCG GGCCGCAAGT TCTGTAAGCT GCAGGAAGGT
GACGTGGTGG CCAAGGTCGA ATTGATCGTT GATCAGACAT CGGTCTTTCT CGTCACTCGC
GAAGCGCGGC TCATTCACTT CTCACTCGAA GAGATTCCTG TCCTTTCTGG AGCAGGGAAA
GGTGTGCGCG GCATTCGCCT GGAAGAGAAA GAGAAGGATC TCGTCCTGGG TGCGGCACTG
ATGTCGCGAC CCAGCGATGT GTTGAGGCTC AAGCTGGCTA ACGAAAAGGA ACTGACCTGC
GGGCAGATGA AATATGCATT GACGACACGT GGAGGCAAAG GGGTCAAGGT CAGCCATCGC
AGTCAGGTGG GCGAAATTGT GCGACCCGAG ATTGCACTGG TGGATTGGAA CAGCATTGAA
GGTTGA
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| Protein sequence | MTENQEDRIQ FREISSETRR RYLNYAMSVI QSRALPDVRD GLKPVQRRIL YVMYEELRLM
ADAKTRKCAK ISGDTTGNYH PHGNQSVYDT LVRLAQDFTL RYPLVDGQGN FGSIMGLPAA
AERYTEARLT GIAEQLMNEL RFDTVEMRPN YDGTRKEPVV LPTRFPNLLV NGTAGIAVGM
ATNMPPHNLK EVLEACIHLI TNPEASTKEL LKFIKGPDFP LGGRMITDRK AMLPIYEEGR
GAFKVRAEWR MDKEKRAEVE DRVVIYSVPY GVETGPLLAE IGNVIASRKL PQLINAADET
DDKHGLRVVL ELKKGSDPES VMAFLYKKTP LEQNFNYNST VLIPDDQGLL TPARLPLHRL
LGEFLKFRLK VVKKRFQFQL DQLQARIHIL RGLEIIFNGI DKAIKIIRNS NGKRDACDKL
MAAFPLDEPQ TMAILEMQLY RISQLEIDTV LAELNTKQKE ADRITRILAK DDRIWNVIEG
ELRELSEQFG DKRRTTLGSS DEVTEFDESH YIVRENTNVV LSKDGWIKRV GRLQSVESTR
VREGDQVLDV LPGSTVDHVI FFASDGIAYT MPISQVPVSS GYGEPLTKHY KFKDGVQVIA
AVTTDPRFTA VAEETAEGAE PAPPHLFVTT AQGQVMRVPL QPFRTASTRS GRKFCKLQEG
DVVAKVELIV DQTSVFLVTR EARLIHFSLE EIPVLSGAGK GVRGIRLEEK EKDLVLGAAL
MSRPSDVLRL KLANEKELTC GQMKYALTTR GGKGVKVSHR SQVGEIVRPE IALVDWNSIE
G
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