Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_2994 |
Symbol | |
ID | 5456432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3192029 |
End bp | 3193117 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640878581 |
Product | polysaccharide deacetylase |
Protein accession | YP_001414258 |
Protein GI | 154253434 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.649589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCACT CAAGCTCCAT TGCCGGCAGG CGCACAGGCG CTCCGAAACC CTCGCTTATG GGCAGGGCTC TGCTTGCCCT GCATGCGGCC GGAGCCCACC GCCTCGCCCC GAAATCGCTG GCAGGCACGG GGGTCATCTT CATGCTGCAC CGGGTGCGGC CCGATGACGG CGCCGACTTC GCGCCGAACC GCCTGCTGGA AGTCACGCCG GATTTTCTGG AAGAGACAAT CGCGACCGTC CGGGCACTGG GCTATAGCTG CCTGTCGCTC GACGACGCCG TGTCGAGGCT CGATGCAGGC GAAAGCACCG AACGCTTCGC CGTTTTCACG CTGGATGATG GCTACCGGGA CAACCTGACC GACGCCCTGC CCGTTTTCGA GCGGCACGAC GTTCCCTTCA CGGTTTACCT GACCACAGGC CTGCCGGATG GCGATGCTGA GATCTGGTGG GTGGCGCTCG AACGGGTCAT CTCCTCCGCC ATCGCCGTGC ATGTAAAGCT GCCGGACGGC GAGATCGCGA TGTTCACGCG CGACGCCGGC GAAAAGACGG AAGCCTGGGG CAAACTTTAT TGGGCGCTGC GCGCTCTGCC GGAAGAGCTG CTGCGCGCGG AGATACGCCG TCTCGCCGCC GAACACGGCA TCGACATGGC GGCGCTGACG CGGGAACTGG CAATGAACTG GGACGAGGTG AGAACGCTCG CCGCTCATCC TCTTGCAAGC ATCGAAGCCC ATACCGCCAA CCACTTCGCA CAGTCGGGAC TTTCGTCGGC CGCTGCAAAG CAGGACATCG AACGTGGTGT GGCGAGAATG GAAGCCGAAC TCGGCCGCCG CCCCACGCAT TTTTCATATC CTTATGGAGA TCACGGTTCG GCCGGGGAGC GCGACTTTGA ACTTGCGCGG GCACTCGGCT TCCGCTCTGC CACCACGACG CGCAAGGGCC TCATTCATGC CTCCCATGCC GGAAGGCTTC ACAGCCTGCC CCGGCTGTCC CTGAATGGAG AGTATCAGGA CCGCAGGATG CTGGAGGTCT TGTTGAGCGG ACTGCCCTTC GCGCTGGGCC GCCGGATACG CGCCCTCGGC ATCGACTAG
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Protein sequence | MNHSSSIAGR RTGAPKPSLM GRALLALHAA GAHRLAPKSL AGTGVIFMLH RVRPDDGADF APNRLLEVTP DFLEETIATV RALGYSCLSL DDAVSRLDAG ESTERFAVFT LDDGYRDNLT DALPVFERHD VPFTVYLTTG LPDGDAEIWW VALERVISSA IAVHVKLPDG EIAMFTRDAG EKTEAWGKLY WALRALPEEL LRAEIRRLAA EHGIDMAALT RELAMNWDEV RTLAAHPLAS IEAHTANHFA QSGLSSAAAK QDIERGVARM EAELGRRPTH FSYPYGDHGS AGERDFELAR ALGFRSATTT RKGLIHASHA GRLHSLPRLS LNGEYQDRRM LEVLLSGLPF ALGRRIRALG ID
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