| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2478 |
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| Symbol | |
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| ID | 5453502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2678814 |
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| End bp | 2679773 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878054 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001413744 |
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| Protein GI | 154252920 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.585884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.517095 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTGGA ATGACCTGAG ATTCTTCCTT GCCGTAGCGG CAGCGGGCAG TCTTTCCGGC
GCCGGGCAAC AGCTTGGCGT CAACACGACC ACCGTCTTGC GTCGCGTGGC CTCCCTTGAG
GACGATCTGG GTGCCCGCCT CTTCGAACGC GAGCGCACCG GCTACCGTTT GACCGCTGCC
GGAGAGAAGC TGGTCGAGGC TCTGGAGCCC GTAGATCGGC GGCTTTCTGC GCTTCCGCGC
GATTTTGCGG CCGCCGGGGA GGGGGCCGAG GGCACCGTGC GGCTGGCGGC GGGGGAGGTT
GTTGCCTCTT CCCTTCTCGC CCCCGAACTC GCCGCTTTCC GTCGCGATCA TCCAGGCCTC
GAGCTCGAAA TACTCACCGA TCCGCGCCTC GCCTCCGTCG GCCCGGCGCC GAGAATCGGC
AATCCTCTCA AGGATGTAGA CGTCGCTCTC CGTCTCGCGC GCCCGACCCA GGGCGACATG
CTGATGCGCA AGGTCGGCGA CATGGCCTAC GGTCTCTACG CGACTCCCAC CTATCTCGAC
AAACACGGCC GTCCATCCGG CATGGCAGCT ATCGCAGGCC ACGACCTGAT CGGCTTTCCG
AAATCGGAAA CACCTCTTGG TCCTGTCTGG TGGTTTTCGC GTGCGGAGAA ATCGGCGAGG
GTGGCGCTTC GTTCGTCGAG TGTCCTGGCG CGGGCGGAAG CGGCACGTCA GGGGCTCGGT
CTTGCGGCGC TGCCCTGCAT TCTCGGCGAT GCGGATGCTG ATCTCGAACG GGTGTTCGGC
CCGGACGATA TCGGTTCGCT GGAAATGTGG CTGATGGCGC GCAACGATCT CGCGCAGCTT
GCCCATGTCC GCGCCGTTAT GGAGTTCGTG GTGGATGCAG TTAAACGTCA CCGGGCGCGG
CTTGAGGGAC GCGACCACGA GGTCAGGGAG CTTCCACCCC GCATTCGCTC AAACCATTGA
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| Protein sequence | MNWNDLRFFL AVAAAGSLSG AGQQLGVNTT TVLRRVASLE DDLGARLFER ERTGYRLTAA
GEKLVEALEP VDRRLSALPR DFAAAGEGAE GTVRLAAGEV VASSLLAPEL AAFRRDHPGL
ELEILTDPRL ASVGPAPRIG NPLKDVDVAL RLARPTQGDM LMRKVGDMAY GLYATPTYLD
KHGRPSGMAA IAGHDLIGFP KSETPLGPVW WFSRAEKSAR VALRSSSVLA RAEAARQGLG
LAALPCILGD ADADLERVFG PDDIGSLEMW LMARNDLAQL AHVRAVMEFV VDAVKRHRAR
LEGRDHEVRE LPPRIRSNH
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