Gene Plav_2473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2473 
Symbol 
ID5453448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand+ 
Start bp2674416 
End bp2675123 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID640878049 
Productnitroreductase 
Protein accessionYP_001413739 
Protein GI154252915 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0563773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.616707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGC TGAAAGGGGA GGCGGGCAAG ATGCAGGAAG CGATGCCGTT TCATGATGTG 
GTTCGCGTCC GCAAATCGGC GCGCAGTTTC CTTGCCGATC CCGTGCCCGA AGCCTTGCTC 
CAGTCCGTGG CCGAGGATGC CCGCCACGCG CCGTCGAATT CCAACGTGCA GCCCTGGGTC 
GTTCACATCG CGTCCGGCGC GGCGCGGGAC AGGCTCAGCA AGGCGCTGCT CGAAGCGGCG 
GCAGAAGAGC GGATGACCCC CGACTTTCCG TTCAGCTACG ACGATCTTTA CGGCGTCTAC 
AGGGAGCGCC AGCAGGCGCA GGGGGCCGCT TATTTTGAGG CGGCCGGCAT CTCGCGCGAT 
GCAGCCGAAC AACGCCGCTT CGCCATCCTG CGCAACCTGG AGTTCTTCGG TGCGCCGCAT 
GTCTGCCTGC TTTTCATGGC GCCGGTCTAC GAGCCGGTGC GTGTGGCGGG AGATGTCGGC 
ATGTATGGCC AGACCTTCCT GCTTTCGCTG GCGGCGCATG GGCTCGCCGG GGTGCCGCAG 
ACGCTGCTCA GCCTCTTTGC CGGTACCGTG CGCGACGTTC TCGGTATCGA TCCTTCGCTC 
AGGATGCTGT TCGGCATCTC GTTCGGCTAT CCCGAACCGG ACAATCCGGT GAACATTTTT 
CCGCTTGGCA AGGCGCCGGT TGCCGAAACC GTGACTTTTC ATCGCTGA
 
Protein sequence
MMKLKGEAGK MQEAMPFHDV VRVRKSARSF LADPVPEALL QSVAEDARHA PSNSNVQPWV 
VHIASGAARD RLSKALLEAA AEERMTPDFP FSYDDLYGVY RERQQAQGAA YFEAAGISRD 
AAEQRRFAIL RNLEFFGAPH VCLLFMAPVY EPVRVAGDVG MYGQTFLLSL AAHGLAGVPQ 
TLLSLFAGTV RDVLGIDPSL RMLFGISFGY PEPDNPVNIF PLGKAPVAET VTFHR