| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_2443 |
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| Symbol | |
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| ID | 5454436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2644093 |
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| End bp | 2647533 |
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| Gene Length | 3441 bp |
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| Protein Length | 1146 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878019 |
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| Product | AsmA family protein |
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| Protein accession | YP_001413709 |
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| Protein GI | 154252885 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.59764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTCGA TACTGACCTA CATAGCGGGG CTGCTGGTCG TTTTGCTGTT TGCGGCGCTG
GTCGGTCCGA GTCTTGTCGA CTGGAATCAG TTCCGCACGG AGATAGAAAC TCAAGCCTCG
CAAGCTGCGG CCCGGCCGGT GAGCATTGAC GGCGATATCC GCTTCCGGAT TCTTCCCGCG
CCTCACCTGA CGCTAGGCAA GATCAAGATC GGCAACGATC CGGACGCGAG CTCCTTGCCT
TCCGATCCTC ACTTCGCGAC TTTCGAGGAG ATCGACGCCG AGATGGCGCT GGCGCCGCTT
CTCAGCGGCG ATATCCAGAT CACGAGTGTG CGCATCGTAA GGCCTCAGAT CAATCTTGAA
GTCTTGCCCG ACGGTTCCGT CAACTGGCGC GGGTTGAATG TCGCCAGCCG CATACCGAAG
GAAGGCATGT TTTCTCTCGC ATCCATCAGC CTGGAAAAAG CAAGCTTCGA AAACGGCACG
GTCAATTATC GCAACCGGGT GAACGGCCGC CGCTGGAAGG CGCAGCAGGT GCAGGGAAGC
GTGATCGCAA CGTCGCTGCT TGGGCCCCTG CGTTCGGAAT TCGAGGCGAC GATCGGGGAT
GTACCGCTCG CGTTTCGTAT CGGCATGGGA AACTTCGCTG GCGACAAGGC CTTTCGCGTG
ACAACCGAGA TGCGGACGCT GGACCATCCG GTGAAGTTCC TCTTCTCGGG CGTCGCAACC
GATTTCTCGC TCGCCGCGCG GCTGGATGGC AATGGGCGGC TTGAGGTCGG CGCGGAAACG
GACCGTGAGG ACGGTACAAA GACCTCGCCG ATCCGCGTGG ATGCGGGGAT GGTGCTGAAT
GCGCGCCGCG CAAGTTTGCG CAACCTTTCG GTCGTGGCGG ATGGCGCTGC GTTGCGCGGT
TCCGCGGAGG CGCGTTGGGA GCAGCGGCCG AGTATGACGC TGCGGCTGAC GGCGGAGAGT
TTTTCGCTCG ATGCGATACT CGCAAAAATC ACAGCGGAGA GCGAAGGAAA GGAAGTCGTC
CATTTGCTGC CGGCGCTGCT TTCGGTACCG GTGCCGGCCT GGCTGGACGG GAACGTGCAT
TTCGAGGCGG ATGCATTGAC TGTCGGAAAG GCGTTGGTGC GAGGTGCCCT GATTGAGGCT
TCGCTGCGTG ACGGTACGCT TGACCTCGAC ACGGTGCGTG GCGAATTTGG CGGCTCGACG
CAACTTTCCA TGTCCGGTGC GCTTGAGCAG CGTGAAGACG GTCCTCATTT TGACGGCACG
GCGCAGATGG AAAGCGGCAA TATCGCCGCC TTCGCATACT GGATTTCGTC AATCACCGAC
ACCGCGAATG GCGCGCGCGC GACACCACGC GGCAGTCCGT TTGCAGCGAG AGCGAGATTG
CGAGCCACGC CGGGCGAATT CGCGGTCGAA AATCTCGTAG CCGATTATGC GCGCGACCTG
ACGGCGCCCG ATCTTCGAGG CGGCGTGGTT TATCGCGCGG CCGAAGAGCG GCCAAGCCTT
GCTCTCACGC TCGACATACG GGATTTCGAC TTCGACCCGC TGATGGCGCT TCTGCCGCAA
GAGGCGGATC CGCTCGCTTT CCTCGCCAGC CACGACGTCG AACTCGCCTT GGACGCAGAG
CGTCTCACGG CCTTCGAACG AACATTGCGC GGTGTGGACG CCGACATGTC TCTGACTGCG
GGCAAGGTCA CCGTCTCCGC ACTTGATGTT GATGACATTG CCGGCGCGAG CCTCTCCTTC
TCCGGTGCAC TCGATGGTGT GACGACGGGC AAGCGAGACG ATGTGAAAGG AAATTTTTCA
GGGACGATCA GAGCGGAACA TTTCGGCGGC CTGCTTGATC TTGGCGGTTT CGATGTTCCG
GATGTCGAAG GCCCTGTCGA ACTTCTGGTG ACAGGAGCTT CCGGCGAGGC GGATGACAGT
CAGGCGCGGG TGGATACGCT GACGCTGCAG GGTACTGTCC GTGGCAGCCG CGTGGACGGC
GTGGTGAAGA GGCGGCACGA GGCGTCGGGC GGTCTCGAAG GGCTCGATAT CATTGCCAAC
GCCACCAACA GCGAAGGACG CATTCTGCTT GAGCAGTTGG GGCTTTCGCC GCGGGCCGAC
CTGCCGGGCG CCGGTTCAGT CGCGGTGCAG CTTGTCGGCG GCCGGAACGG CACCTACGAC
ACGAATTTCC GCGCCAATGT AAATGGTACG ACGCTCACGG CGCGAGGCGA GGTTGCCCAG
CCTTTTGAAG CACTCCGGTT TACCGGGCGC GCGGAAATCG CGGCTTCGGG CGTCCTGCAT
GCACTTGGTG CTTTCGGCGC TCCGGCTGCG CTGACCGCTT GGGTGGGTGA GCAGGCGTCG
GGGCCCGGTT TCGTTTTCTC GTCAGATGTC GTCTGGGACA AGGAAAGCCT CGAACTGAAA
GGTTTCGAGA GCGTGGCCGG CAATTTCCAT CTCTCGGGAA CGGCAGGATG GAAAGCCGGC
ACGGAGGGAG GGTTGCCTTC TGTTTCCGGT GTGCTCGAGG CCAATGCACT GGACCTCACG
TCGCTCGCAG TGGCGGATAA AGAAGATGGC GACATCTGGC CCGTGGCGGC GCTCGACTGG
TCGTTGCTGG GAGCTTTCGA CGGTGGCGTG GAGTTGAAAG CGGGGCGTCT TTCACTCGGT
ACGGTCGCAA TCAGCGATGT GGAGACCCAG GTTACCGTAT CGCATGGTGT TCTCACCGCT
TCGCCTTTCG CAGGGCGTTT TGCGGGAGGC CGCGTTTCTG CCGGTGCGCG TGTCGAGGGT
GGTGCGGGGG AGCCGGGTGT TGGATTGACC CTGGCTGTGC AAGAGGCAGA TGTCGCGCGC
GCTTTTGGTG CCGCTCTTGG CGCAACGCCG GGAACCGGCA AGTTCGATCT CGATGTCCAG
TTGCAGGGCC AAGGGCGGAG TTGGTTCTCC CTTGTGTCGT CGGTGACGGG GGCCGGAACA
ATCCGCTTCA CGGATGCGGC GTTCAGGCCT GTTGATGTGG CCGGGTTTGG CGCTGCGCTG
GTGGAGCTTC AGTCGGTGGA TGCGTTTGCC CCGCTCGTGG AAAAGACATT GCGCGCAGGA
GCGACGGCAG CGAGCGATAT TGGCGGCGAG TTCATGCTCG AAGACGGCGT GCTGCGCTTT
GCCGATGACG CGGTGTCGAT CGAGGGGGGC TCAGCGCAGA TCACCGCGCT CTACGATCTG
CCGCGCCTGA TTTCGCAGGC CGAACTGACG GTCACGCTGA ACGAACCCGC GAGTGCTCCC
ACCTTCTCGA TCGAGGCTGC GGGAAAGGGC ACTCAAATGA CTGTCGAGAC GGAGACGCTC
GCGCTGCAGA ATTTCGTTGC GCGGCGGATA CTCAGAGAGA ATGTCCGGGA TGCAGGCGCA
GACTTGCCGC AGGACCTGCG TGACCTGATG GATCTGCCGC AAGACAATGC GGCTGTGCCG
CTGCCACGGC CTTCTCTCTA G
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| Protein sequence | MNSILTYIAG LLVVLLFAAL VGPSLVDWNQ FRTEIETQAS QAAARPVSID GDIRFRILPA
PHLTLGKIKI GNDPDASSLP SDPHFATFEE IDAEMALAPL LSGDIQITSV RIVRPQINLE
VLPDGSVNWR GLNVASRIPK EGMFSLASIS LEKASFENGT VNYRNRVNGR RWKAQQVQGS
VIATSLLGPL RSEFEATIGD VPLAFRIGMG NFAGDKAFRV TTEMRTLDHP VKFLFSGVAT
DFSLAARLDG NGRLEVGAET DREDGTKTSP IRVDAGMVLN ARRASLRNLS VVADGAALRG
SAEARWEQRP SMTLRLTAES FSLDAILAKI TAESEGKEVV HLLPALLSVP VPAWLDGNVH
FEADALTVGK ALVRGALIEA SLRDGTLDLD TVRGEFGGST QLSMSGALEQ REDGPHFDGT
AQMESGNIAA FAYWISSITD TANGARATPR GSPFAARARL RATPGEFAVE NLVADYARDL
TAPDLRGGVV YRAAEERPSL ALTLDIRDFD FDPLMALLPQ EADPLAFLAS HDVELALDAE
RLTAFERTLR GVDADMSLTA GKVTVSALDV DDIAGASLSF SGALDGVTTG KRDDVKGNFS
GTIRAEHFGG LLDLGGFDVP DVEGPVELLV TGASGEADDS QARVDTLTLQ GTVRGSRVDG
VVKRRHEASG GLEGLDIIAN ATNSEGRILL EQLGLSPRAD LPGAGSVAVQ LVGGRNGTYD
TNFRANVNGT TLTARGEVAQ PFEALRFTGR AEIAASGVLH ALGAFGAPAA LTAWVGEQAS
GPGFVFSSDV VWDKESLELK GFESVAGNFH LSGTAGWKAG TEGGLPSVSG VLEANALDLT
SLAVADKEDG DIWPVAALDW SLLGAFDGGV ELKAGRLSLG TVAISDVETQ VTVSHGVLTA
SPFAGRFAGG RVSAGARVEG GAGEPGVGLT LAVQEADVAR AFGAALGATP GTGKFDLDVQ
LQGQGRSWFS LVSSVTGAGT IRFTDAAFRP VDVAGFGAAL VELQSVDAFA PLVEKTLRAG
ATAASDIGGE FMLEDGVLRF ADDAVSIEGG SAQITALYDL PRLISQAELT VTLNEPASAP
TFSIEAAGKG TQMTVETETL ALQNFVARRI LRENVRDAGA DLPQDLRDLM DLPQDNAAVP
LPRPSL
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