Gene Plav_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2212 
Symbol 
ID5454035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2389146 
End bp2389658 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content65% 
IMG OID640877791 
Productresponse regulator receiver protein 
Protein accessionYP_001413483 
Protein GI154252659 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.206019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG TACCGACCAG CGCGGATGCC GGCTTCTTTC GCAAGCTCAG GGTGCTGATC 
GTCGATGACA GCATCGAGAT GCGGCGTCTG CTGATCGCGT TGCTCGAATC CATGGAAGTC
GGCGAGATCG TCGAGGCCCG CGACGGCGCG AAGGGACTTG AAGCCTTCGC CGCTCATCGT
CCCGACATCA TCATCACCGA CGGATCGATG GTGCCGATGG ACGGCTATGA AATGACGCGC
CGGATAAGGG CCTCGGCGAG CGGCGAAGGT GCCAACCCCG ATGTGCCGAT CCTGATGATT
TCCGGCCATA TCGGCCGCGA GAATGTCGTC CATGCGCGCG ACCAGGGCGT CACCGACTAT
CTGCCGAAGC CGCTTTCGGC GCCTGTGCTC TACGAAGCCA TCGTCGCGGC GGCGTCGCGG
CCCATCCACT TCGTCGAAAA GCCCGGTTAT CGCGGCCCCT CGCCGACACG CCGCCTCGAA
GCGCGCCAGC CGGGTAGCGA CCCGCACTCC TGA
 
Protein sequence
MTEVPTSADA GFFRKLRVLI VDDSIEMRRL LIALLESMEV GEIVEARDGA KGLEAFAAHR 
PDIIITDGSM VPMDGYEMTR RIRASASGEG ANPDVPILMI SGHIGRENVV HARDQGVTDY
LPKPLSAPVL YEAIVAAASR PIHFVEKPGY RGPSPTRRLE ARQPGSDPHS