Gene Plav_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_2105 
Symbol 
ID5454713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp2287196 
End bp2288215 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content61% 
IMG OID640877682 
Productfructose-bisphosphate aldolase 
Protein accessionYP_001413376 
Protein GI154252552 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3588] Fructose-1,6-bisphosphate aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.267884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0305048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA CGCTTGAATC GATTGCACAG GCGATGGTTG CGCCGGGCAA AGGCATTCTG 
GCCGCCGACG AAAGCTCCGG CACGATCAAG AAGCGCTTTG ACAGCATCAA GGTGGAATCG
ACGGAGGATA CGCGCCGCGA TTACCGGGAG ATGCTGTTTC GTACCGACGA GGCGATGCGG
AACCACATTT CGGGCGTGAT CCTTTACGAC GAGACAATCC GCCAGAAGGC GAAGGACGGC
ACGCCGCTCG TCGACCTTAT CAAAAAGGCC GGCGCCATTC CGGGGATCAA GGTCGATGCG
GGCGCGAAAG ATATGCCCGG CTTCCCCGGC GAAAAGATCA CCGAAGGTCT CGACGGGCTC
GATGCACGGC TCGCGGAGTA CTACCAGCTC GGCGCCCGCT TTGCGAAATG GCGCGCCGTC
ATCGACATCG CCGACGGCAT TCCGACGCGG ACCTGCCTCG AAGCCAATGC TGAGGCTCTC
GCGCGGTATG CGGCGCTTTG CCAGCAGGCA AAGATCGTTC CGATCGTGGA ACCGGAAGTG
CTGATGGATG GCGCACACGA TATCGACCGC TGCTTTGAGG TAACCGAGGA AACCTTGCGC
ATCCTCTTCG ACCGTCTCGG CGCGCACCGG GTAAATCTCG AAGGCACGAT CCTGAAGCCG
AACATGGTGA TTGCCGGCAA GAAGTGCGGA AAGCAGGCGA GCGTCGAGGA AGTGGCCGAA
AAAACCATTG CCTGCTTCAA GCGGACCGTT CCCGCCGCCA TTCCGGGCAT CGTCTTCCTT
TCCGGCGGCC AGTCGGACGA GGATGCGACA GCGCATCTGA ACGCGATGAA TGCCATTGGC
GGCTTCCCCT GGAAGATGTC CTTCTCCTAT GGCCGCGCAT TGCAGGCGGC TCCGCTGAAA
GCATGGAGCG GCAAGCCGGA GAATGTTCCC GCCGGCCAGA AGGCATTCCT GCACCGCGCA
AAAATGAACG GCCTCGCAGC GCTCGGCGAC TGGAAGAGCG CCCTGGAAAA AGCCGCCTGA
 
Protein sequence
MTETLESIAQ AMVAPGKGIL AADESSGTIK KRFDSIKVES TEDTRRDYRE MLFRTDEAMR 
NHISGVILYD ETIRQKAKDG TPLVDLIKKA GAIPGIKVDA GAKDMPGFPG EKITEGLDGL
DARLAEYYQL GARFAKWRAV IDIADGIPTR TCLEANAEAL ARYAALCQQA KIVPIVEPEV
LMDGAHDIDR CFEVTEETLR ILFDRLGAHR VNLEGTILKP NMVIAGKKCG KQASVEEVAE
KTIACFKRTV PAAIPGIVFL SGGQSDEDAT AHLNAMNAIG GFPWKMSFSY GRALQAAPLK
AWSGKPENVP AGQKAFLHRA KMNGLAALGD WKSALEKAA