Gene Plav_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1750 
Symbol 
ID5454079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1893325 
End bp1894092 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content62% 
IMG OID640877325 
ProductMOSC domain-containing protein 
Protein accessionYP_001413026 
Protein GI154252202 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.340941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGATA GCGCCACAAT CGTCGGCCTC TACCGCTACC CGGTCAAGGG TTTATCGCCC 
GAGCCGCTGG CGGAGGTAAC GCTTCAGGCG GGAGAGACTT TCCCCTGGGA CCGCGCTTTC
GCGATCGAAA ACGGCAAGCA TGATTTCGAT CCGGCAAACC CGAAGCATTT TCCCAAGATC
AAATTCCTGA TGCTGATGCG CGATGAGCGG CTGGCGGCGC TGAAAACGCA TTTCGACGAT
GCGACCACGA CGCTGACGGT GGCGAAGGAC GGGAGCGAGG TGTTGCGCGC CAACCTGATG
ACGCCGGAGG GACGCACGGC GCTGGAAGAC TTCATGCGCG GCTATATGGA AAAGGAATTG
CGCGGGCTTC CCCGCGTCGT CCATGCGCCG GGCTTTTCGC ATTCGGATGC ACCGGCGAAG
CTCGTCTCGA TCATCAACAT GGCCAGCGTG CGGGCGCTGG AGGAGAAGAT CGGCGCGCAT
GTGAACCCGC TCCGCTTCCG CGCCAATATC TATCTCGAGG GGCTGGAGCC CTGGGAGGAC
CATGAATGGG TGGGACGGCG CTTCCGCCTC GGCGAAGCGG GCTTTACCGG CATTCACAAG
ACGGTGCGCT GCGCGGCGAC CAATGTCGAC CCGGCGACGG CGGCGCGCGA CATGGAAATT
CCGGCGGCCC TGATGAAACA TTGGGGCCAT GCCGATCTCG GCCTTTATGC CGAAATAAAA
TCGCCGGGCA CATTGAAGCC CGGCGATCGT CTCGTGTTCG AAGAATAG
 
Protein sequence
MGDSATIVGL YRYPVKGLSP EPLAEVTLQA GETFPWDRAF AIENGKHDFD PANPKHFPKI 
KFLMLMRDER LAALKTHFDD ATTTLTVAKD GSEVLRANLM TPEGRTALED FMRGYMEKEL
RGLPRVVHAP GFSHSDAPAK LVSIINMASV RALEEKIGAH VNPLRFRANI YLEGLEPWED
HEWVGRRFRL GEAGFTGIHK TVRCAATNVD PATAARDMEI PAALMKHWGH ADLGLYAEIK
SPGTLKPGDR LVFEE