Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1546 |
Symbol | |
ID | 5455996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1687725 |
End bp | 1688258 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640877119 |
Product | hypothetical protein |
Protein accession | YP_001412822 |
Protein GI | 154251998 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAC CACATGAGCA CGCAGGCGGA GAGCGTCACC ATTGCGCGCT TTGCCCGCCG GGAGAGCATC GCGGCGGGCT CGTGCCCTTC GCCGCCATTC ACGAGCCCGT TCTCGATCTC GTTCGGGCCG ACCATCCGGA CCTGCCGGCC GAGGGTTTTC TCTGCCACCG CCATCTCGAC CATTACCGCG ACCTCTATGT CCGCCGCGCC ATCGAGGCGG ACAAGGGCCA ACTCGACGAG CTGGAAAAGG AAGTCCTCCG GAGCCTGGAG GAGAACGACA TCCTCGCAGA GAATGCCGAG GAGGTTTTCG AGGGAACGCG CACGGTCGGC GAAAGATTGT CGGACGTCAT TGCGGATTTC GGCGGCAGCT GGCGTTTCAT CCTCTTTTTC GGGGCGGTCC TGTTCGGCTG GATCGGGCTC AATCTCGCCG GGCTCTTCGC CGATCCGTTC GATCCCTATC CTTTCATCCT GCTCAATCTC GTGCTTTCCT GCCTCGCCGC CATCCAGGCG CCGAAAAACT CGACCACCTG CTGA
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Protein sequence | MSKPHEHAGG ERHHCALCPP GEHRGGLVPF AAIHEPVLDL VRADHPDLPA EGFLCHRHLD HYRDLYVRRA IEADKGQLDE LEKEVLRSLE ENDILAENAE EVFEGTRTVG ERLSDVIADF GGSWRFILFF GAVLFGWIGL NLAGLFADPF DPYPFILLNL VLSCLAAIQA PKNSTTC
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