Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1405 |
Symbol | |
ID | 5455800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1538927 |
End bp | 1539604 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876978 |
Product | heme exporter protein CcmB |
Protein accession | YP_001412682 |
Protein GI | 154251858 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGG CCTTTTTCGC GCTTCTCCTC CGCGATCTTC GTCTCGCCGC CCGGCTTGGC GGCGGCGGAG GCATGGCCGT CTTCTTCTTC CTGGTCGTTG TCGCCATCGT GCCGCTCGGC ATCGGTCCCG AAAAGGGGCT GCTCTCGGCC ATAGCGCCCG GCATGCTCTG GGTGGCGCTG CTGCTGGCGG CGCTGTTAAC GCTCGACCGG CTCTTCCAGG CCGATTTCGA GGATGGATCG CTCGATCTGC TCTCCACGGG GTCTCTGCCG CTTGAACTTG TGGCGGTCGC GAAGGCGCTC GGACATTGGC TCACCACGGG CCTCCCCCTT GTGGTGGCCG CCCCGCTGCT CGGGCTCCTC CTCAATCTGC CGGCAGACGC CTTTCCCCAG CTTCTTCTTG CAATGCTTGT CGGTACGCCC GCCTTGAGCT TTCTGGGTGC CATAGGCGCC GCGCTGACCG TCGGGATCCG GCGGGGCGGG CTTCTTGCCT CGCTTCTGGT GCTGCCTTTC TATATTCCGG TGCTGATTTT CGGCGTTGGC GCGGCCAGCT CGGCATCCGC GAGTTTCGAG GGCGAGGCGG GGCCCCAGAG CCTGTTGCTT CTGGGCGCGG TCACGCTTGG CAGTTTCGTG CTGGGGCCCG TCGGTGCCGC CGCCGCGCTC CGCGCCCATC TCAGATGA
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Protein sequence | MMRAFFALLL RDLRLAARLG GGGGMAVFFF LVVVAIVPLG IGPEKGLLSA IAPGMLWVAL LLAALLTLDR LFQADFEDGS LDLLSTGSLP LELVAVAKAL GHWLTTGLPL VVAAPLLGLL LNLPADAFPQ LLLAMLVGTP ALSFLGAIGA ALTVGIRRGG LLASLLVLPF YIPVLIFGVG AASSASASFE GEAGPQSLLL LGAVTLGSFV LGPVGAAAAL RAHLR
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