4 homologs were found in PanDaTox collection
for query gene Plav_1282 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1282  porin  100 
 
 
377 aa  738    Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2211  porin  32.41 
 
 
362 aa  112  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2212  hypothetical protein  30.11 
 
 
348 aa  111  2.0000000000000002e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.541863  n/a   
 
 
-
 
NC_008391  Bamb_4301  hypothetical protein  25.48 
 
 
493 aa  43.5  0.007  Burkholderia ambifaria AMMD  Bacteria  normal  0.0574645  normal 
 
 
-
 
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